<div dir="ltr">hi Pooja,<br><div><br></div><div>there is no way to work with a surface source space of deep structures in MNE.</div><div>You should use a volume source space. Here is a good example to start:</div><div><br></div><div><a href="https://martinos.org/mne/stable/auto_examples/forward/plot_left_cerebellum_volume_source.html">https://martinos.org/mne/stable/auto_examples/forward/plot_left_cerebellum_volume_source.html</a><br></div><div><br></div><div>HTH</div><div>Alex</div><div><br></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Mar 22, 2018 at 3:07 PM, pooja prabhu <span dir="ltr"><<a href="mailto:prabhuppooja@gmail.com" target="_blank">prabhuppooja@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div class="gmail_default" style="font-family:arial,helvetica,sans-serif">Hello,<br></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif">This is Pooja Prabhu. I was trying to segment the hippocampus and model it. I could successfully segment using Freesurfer (using -hippocampal-subfields). I am not able to tessellate it. Could you pleqse tell me how can i model the Hippocampus alone so that i can place dipole on every vertex using MNE-python. <br>I have used "mne_watershed_bem" to get brain surface, inner skull, outer skull, outer skin surface, apart from these i want hippocampus surface, is there any way that i can do it in MNE-python. <br>Please help me. <br></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif">Thank You<span class="HOEnZb"><font color="#888888"><br clear="all"></font></span></div><span class="HOEnZb"><font color="#888888"><br>-- <br><div class="m_6657662915611197991gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr">Thank You<div>Pooja Prabhu</div><div><br></div></div></div></div></div>
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