<p><span style="padding: 3px 10px; border-radius: 5px; color: #ffffff; font-weight: bold; display: inline-block; background-color: #ff0000;"> External Email - Use Caution </span></p><p></p><div dir="ltr"><div dir="ltr"><div>Well then there's one explanation anyway... I'm using the subject's own reconstructed MR. <br></div><div>Plotting using brain.add_foci(vertex, coords_as_verts=True, hemi='lh', color=(1,0,0)) where brain = stc.plot().</div><div><br></div><div>Karin<br></div></div></div><br><div class="gmail_quote"><div dir="ltr">Den sön 30 sep. 2018 kl 18:10 skrev Marijn van Vliet <<a href="mailto:w.m.vanvliet@gmail.com">w.m.vanvliet@gmail.com</a>>:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi karin,<br>
<br>
How are you plotting the result exactly? This line:<br>
<br>
surf = mne.surface._get_ico_surface(5)<br>
<br>
only works for the fsaverage brain.<br>
<br>
best,<br>
Marijn.<br>
<br>
> On 30 Sep 2018, at 18:08, Karin Westin <<a href="mailto:karin.westin85@gmail.com" target="_blank">karin.westin85@gmail.com</a>> wrote:<br>
> <br>
> surf = mne.surface._get_ico_surface(5)<br>
<br>
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