<p><span style="padding: 3px 10px; border-radius: 5px; color: #ffffff; font-weight: bold; display: inline-block; background-color: #ff0000;"> External Email - Use Caution </span></p><p></p><div dir="ltr"><div dir="ltr"><div dir="ltr">
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><b><span style="font-size:13.5pt;font-family:"Times New Roman"">Dear
Alexandre and Alexander,<span></span></span></b></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span style="font-size:10pt;font-family:"Times New Roman"">I also fwd this
message to the <a href="mailto:mne_analysis@nmr.mgh.harvard.edu" target="_blank"><span style="color:blue">mne_analysis@nmr.mgh.harvard.edu</span></a><span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US"><br></span></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US">Results
of .drop_bad in v </span><span lang="EN-US">0.16.2
(python 3.6.6) and .drop_bad_epochs in 0.12.dev (python </span><span lang="EN-US">2.7.6</span><span lang="EN-US">) are
different.</span><span lang="EN-US"><span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US">This
is not filtering. I tested performance of the <span> </span>.drop_bad in v </span><span lang="EN-US">0.16.2 (python 3.6.6) and .drop_bad_epochs
in 0.12.dev (python </span><span lang="EN-US">2.7.6</span><span lang="EN-US">) without any additional operations on the
data.<span> </span>Result is clearly different! The
difference, however, starts only after the 25<sup>th</sup> epoch.<span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US"><span> </span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US">I did:<span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><b><span lang="EN-US">data=epochs_rej.get_data()<br>
<span></span></span></b></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><b><span lang="EN-US">average_over_epoch=np.mean(np.mean(data [:,
0:306, :], 2),1)<br>
<span></span></span></b></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US">The<span> </span>‘<b>average_over_epoch</b>’
is exactly the same in both versions up to the 25<sup>th</sup> epoch, but is
absolutely different afterwards. <span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US"><span> </span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US">I
uploaded the epoches and the corresponding raw files:<span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US"><span><br></span></span></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US"><span> <a href="https://we.tl/t-Rmfow2yf2k" target="_blank">https://we.tl/t-Rmfow2yf2k</a><br></span></span></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">and <br></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><a href="https://we.tl/t-N69ztC2qtt">https://we.tl/t-N69ztC2qtt</a></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><br></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria"><span lang="EN-US"><span></span></span></p>
<div><br></div><div>Best regards, <br></div><div>Elena<br></div><div><span style="font-size:8pt;font-family:Cambria" lang="EN-US"><span style="font-size:8pt;font-family:Cambria" lang="EN-US"></span>
</span>
</div><br><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">---------- Forwarded message ---------<br>From: <b class="gmail_sendername" dir="auto">Alexandre Gramfort</b> <span dir="ltr"><<a href="mailto:alexandre.gramfort@telecom-paristech.fr" target="_blank">alexandre.gramfort@telecom-paristech.fr</a>></span><br>Date: Tue, 5 Feb 2019 at 22:40<br>Subject: Re: [Martinos-python] .drop_bad problem<br>To: Rockhill, Alexander P. <<a href="mailto:AROCKHILL@mgh.harvard.edu" target="_blank">AROCKHILL@mgh.harvard.edu</a>><br>Cc: Elena Orekhova <<a href="mailto:orekhova.elena.v@gmail.com" target="_blank">orekhova.elena.v@gmail.com</a>><br></div><br><br><div dir="ltr"><div dir="ltr">hi,<div><br></div><div>you should ask such questions on the MNE mailing list:</div><div><br></div><div><a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" target="_blank">https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis</a></div><div><br></div><div>it could be due to the change in default parameters for filtering if you apply any.</div><div><br></div><div>my 2c</div><div><br></div><div>Alex</div><div><br></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Feb 5, 2019 at 7:54 PM Rockhill, Alexander P. <<a href="mailto:AROCKHILL@mgh.harvard.edu" target="_blank">AROCKHILL@mgh.harvard.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div dir="ltr">
<div id="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594divtagdefaultwrapper" style="font-size:10pt;color:rgb(0,0,0);font-family:Tahoma,Geneva,sans-serif" dir="ltr">
<p style="margin-top:0px;margin-bottom:0px">Hi Elena,</p>
<p style="margin-top:0px;margin-bottom:0px"><br>
</p>
<p style="margin-top:0px;margin-bottom:0px"> What do you mean by the real order of the epochs was different? It may be helpful share the output of epochs.events before and after using .drop_bad for both versions.</p>
<p style="margin-top:0px;margin-bottom:0px"><br>
</p>
<p style="margin-top:0px;margin-bottom:0px">Best,</p>
<p style="margin-top:0px;margin-bottom:0px"><br>
</p>
<p style="margin-top:0px;margin-bottom:0px">Alex <br>
</p>
<p style="margin-top:0px;margin-bottom:0px"><br>
</p>
<div id="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594Signature">
<div style="font-family:Tahoma;font-size:13px">
<div class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594BodyFragment"><font size="2"><span style="font-size:10pt">
<div class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594PlainText">Translational NeuroEngineering Laboratory<br>
Division of Neurotherapeutics, Department of Psychiatry<br>
Massachusetts General Hospital, Martinos Center<br>
149 13th St Charlestown #2301, Boston, MA 02129</div>
</span></font></div>
</div>
</div>
</div>
<hr style="display:inline-block;width:98%">
<div id="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594divRplyFwdMsg" dir="ltr"><font style="font-size:11pt" face="Calibri, sans-serif" color="#000000"><b>From:</b> <a href="mailto:martinos-python-bounces@nmr.mgh.harvard.edu" target="_blank">martinos-python-bounces@nmr.mgh.harvard.edu</a> <<a href="mailto:martinos-python-bounces@nmr.mgh.harvard.edu" target="_blank">martinos-python-bounces@nmr.mgh.harvard.edu</a>> on behalf of Elena Orekhova <<a href="mailto:orekhova.elena.v@gmail.com" target="_blank">orekhova.elena.v@gmail.com</a>><br>
<b>Sent:</b> Tuesday, February 5, 2019 12:43:25 PM<br>
<b>To:</b> <a href="mailto:martinos-python@nmr.mgh.harvard.edu" target="_blank">martinos-python@nmr.mgh.harvard.edu</a><br>
<b>Subject:</b> [Martinos-python] .drop_bad problem</font>
<div> </div>
</div>
<div>
<p><span style="padding:3px 10px;border-radius:5px;color:rgb(255,255,255);font-weight:bold;display:inline-block;background-color:rgb(255,0,0)"> External Email - Use Caution </span></p>
<p></p>
<div dir="ltr">
<div class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-adn gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-ads">
<div class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-gs">
<div class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-">
<div id="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-:pr" class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-ii gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-gt gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-adO">
<div id="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-:ps" class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-a3s gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-aXjCH">
<div dir="ltr">
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Dear experts,<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:6pt 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">I moved from </span><span style="font-size:10pt" lang="EN-US">MNE version 0.12.dev0 (Python:<span>
</span>2.7.6 | 64-bit |)<span> </span>to mne version 0.16.2 (3.6.6 |Anaconda, Inc.|) and noticed a problem.<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:6pt 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">There was a difference in the result after applying
<span></span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
epochs.drop_bad (reject=reject, flat=flat) in the two MNE versions.<span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span> </span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
Although the number and the order of the events left after applying ‘.drop_bad’ (or ‘.drop_bad_epochs’ in 0.12.dev0) was exactly the same in<span style="font-family:Cambria"> the two MNE versions,
<span> </span>the real order of the epochs was different.<span> </span>Inspection of the results suggests that the error is in the 0.16.2, not
</span>0.12.dev0<span style="font-family:Cambria"><span></span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span style="font-family:Cambria"><span> </span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span style="font-family:Cambria">Below is the information about software I used.
<span></span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span style="font-family:Cambria"><span> </span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span style="font-family:Cambria">Best regards,<span></span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span style="font-family:Cambria">Elena<span></span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span style="font-family:Cambria"><span> </span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
###########################<span style="font-family:Cambria"><span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<b><span style="font-size:10pt" lang="EN-US">mne:<span> </span>0.12.dev0:<span></span></span></b></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">mne.sys_info() <b><span></span></b></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Platform:<span> </span>Darwin-18.2.0-x86_64-i386-64bit
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Python:<span> </span>2.7.6 | 64-bit |<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">(default, Sep 15 2014, 17:43:19) [GCC 4.2.1 (Apple Inc. build 5666) (dot 3)]
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Executable:<span> </span>/Users/elena/Library/Enthought/Canopy_64bit/ User/bin/pythonw<span>
</span><span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<b><span style="font-size:10pt" lang="EN-US">mne:<span> </span>0.12.dev0
<span></span></span></b></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">numpy:<span> </span>1.10.4<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">{lapack=mkl_lapack95_lp64, blas=mkl_intel_lp64}
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">scipy:<span> </span>0.17.0<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">matplotlib:<span> </span>1.4.2<span>
</span><span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">sklearn:<span> </span>0.17 <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">nibabel:<span> </span>2.0.1<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">nitime:<span> </span>Not found <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">mayavi:<span> </span>4.4.3<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">nose:<span> </span>1.3.4 <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">pandas:<span> </span>0.15.2 <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">pycuda:<span> </span>Not found <span>
</span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
skcuda:<span> </span>Not found<span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
<span> </span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
###########################<span style="font-family:Cambria"><span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<b><span style="font-size:10pt" lang="EN-US">mne:<span> </span>0.16.2: <span>
</span></span></b></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">mne.sys_info() <span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Platform:<span> </span>Darwin-18.2.0-x86_64-i386-64bit
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Python:<span> </span>3.6.6 |Anaconda, Inc.|
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">(default, Jun 28 2018, 11:07:29) <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">[GCC 4.2.1 Compatible Clang 4.0.1 (tags/RELEASE_401/final)]
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Executable:<span> </span>/Users/elena/anaconda3/envs/mne/bin/python
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">CPU:<span> </span>i386: 4 cores<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">Memory:<span> </span>16.0 GB<span>
</span><span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">mne:<span> </span>0.16.2 <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">numpy:<span> </span>1.15.2 {blas=mkl_rt, lapack=mkl_rt}
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">scipy:<span> </span>1.1.0 <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">matplotlib:<span> </span>3.0.0 {backend=Qt5Agg}<span>
</span><span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">sklearn:<span> </span>0.20.0<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">nibabel:<span> </span>2.3.1 <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">mayavi:<span> </span>4.6.2 {qt_api=pyqt5}
<span></span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">pycuda:<span> </span>Not found <span>
</span></span></p>
<p class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:12pt;font-family:Cambria">
<span style="font-size:10pt" lang="EN-US">skcuda:<span> </span>Not found <span>
</span></span></p>
<p style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Times New Roman"">
pandas:<span> </span>0.23.4<span class="gmail-m_-7621538385192612404gmail-m_-7937973852576123884gmail-m_6371662380010101594x_gmail-HOEnZb"><font color="#888888"><span></span></font></span></p>
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</div><br clear="all"><br>-- <br><div dir="ltr" class="gmail-m_-7621538385192612404gmail_signature"><div dir="ltr"><div>Best regards,</div><div>Elena V. Orekhova<br></div></div></div></div></div></div>