<p><span style="padding: 3px 10px; border-radius: 5px; color: #ffffff; font-weight: bold; display: inline-block; background-color: #ff0000;"> External Email - Use Caution </span></p><p></p><div dir="ltr">You probably want to:<div><br></div><div>1. Use <a href="https://surfer.nmr.mgh.harvard.edu/fswiki/mri_vol2surf">mri_vol2surf from FreeSurfer</a></div><div>2. Read that output with <a href="https://nipy.org/nibabel/reference/nibabel.freesurfer.html#module-nibabel.freesurfer.io">a suitable nibabel function</a><div>3. Decide which surface vertices to use (e.g., by thresholding the NumPy arrays), and</div><div>4. Create <a href="https://mne.tools/dev/generated/mne.Label.html">a mne.Label</a> from them</div><div><br></div><div>Eric</div></div><div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Sep 22, 2020 at 5:47 AM נועה הכהן <<a href="mailto:noa1hc@gmail.com">noa1hc@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><p><span style="padding:3px 10px;border-radius:5px;color:rgb(255,255,255);font-weight:bold;display:inline-block;background-color:rgb(255,0,0)"> External Email - Use Caution </span></p><p></p><div dir="rtl"><div dir="ltr">Hello all,</div><div dir="ltr">I have nifti files with fmri localizer results. I want to use them to define ROI for source analysis. How can I read these files to MNE, and convert them from volume to surface?</div><div dir="ltr">thanks in advance,</div><div dir="ltr">Noa</div><div dir="ltr"><br></div><div dir="ltr"><br></div></div>
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