<p><span style="padding: 3px 10px; border-radius: 5px; color: #ffffff; font-weight: bold; display: inline-block; background-color: #ff0000;"> External Email - Use Caution </span></p><p></p><div dir="ltr">Yes, Thanks.<br></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Thu, Oct 8, 2020 at 9:55 PM Eric Larson <<a href="mailto:larson.eric.d@gmail.com">larson.eric.d@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><p><span style="padding:3px 10px;border-radius:5px;color:rgb(255,255,255);font-weight:bold;display:inline-block;background-color:rgb(255,0,0)"> External Email - Use Caution </span></p><p></p><div dir="ltr">Can you see if this tutorial is sufficient?<div><br></div><div><a href="https://mne.tools/dev/auto_tutorials/preprocessing/plot_20_rejecting_bad_data.html#rejecting-epochs-based-on-channel-amplitude" target="_blank">https://mne.tools/dev/auto_tutorials/preprocessing/plot_20_rejecting_bad_data.html#rejecting-epochs-based-on-channel-amplitude</a><br></div><div><br></div><div>Eric</div><div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Thu, Oct 8, 2020 at 4:20 AM Vivek Sharma <<a href="mailto:vivek.sharma1510@gmail.com" target="_blank">vivek.sharma1510@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><p><span style="padding:3px 10px;border-radius:5px;color:rgb(255,255,255);font-weight:bold;display:inline-block;background-color:rgb(255,0,0)"> External Email - Use Caution </span></p><p></p><div dir="ltr">Hi,<div>I'm using the following example for the removal of the artifacts for my MEG data.</div><div><a href="https://mne.tools/0.16/auto_tutorials/plot_ica_from_raw.html" target="_blank">https://mne.tools/0.16/auto_tutorials/plot_ica_from_raw.html</a></div><div>For defining the reject in ica.fit (<span>ica</span><span>.</span><span>fit</span><span>(</span><span>raw</span><span>, </span><span>picks</span><span>=</span><span>picks</span><span>, </span><span>decim</span><span>=</span><span>3</span><span>, </span><span>reject</span><span>=</span><span>dict</span><span>(</span><span>mag</span><span>=</span><span>4e-12</span><span>,</span> <span>grad</span><span>=</span><span>4000e-13</span><span>), </span><span>verbose</span><span>=</span><span>'warning'</span><span>)</span></div><div>I'm using the default values <span>(</span><span>mag</span><span>=</span><span>4e-12</span><span>,</span> <span>grad</span><span>=</span><span>4000e-13</span><span>), but for some data, it's showing this error (No clean segment found. please consider updating your rejection thresholds.)</span></div><div>How do we define these reject values? Is there a default that can be considered or is it data specific and needs to be calculated for every participant's data if so does anyone know how to do that?</div><div>Thanks.<br><div><br></div>-- <br><div dir="ltr"><div dir="ltr"><div><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div><span style="font-size:12.8px">Vivek Sharma</span></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div>
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