[Homer-users] Simultaneous display of raw data and stimulus condition

Sat Oct 20 10:28:36 EDT 2012

I do not see any attachment. The warning you get saying 1 of the trials is
excluded is fine, let me know if there is anything else. I'd try to
download a fresh homer and rerun.

Meryem

>
>
> I checked and s and d are the same size (same no of rows).  I've attached
> a pdf of the variables.  Also, I've pasted SD below.  Meanwhile I'll try
> to debug to find where I'm getting the warning when the data loads.
>
> SD =
>          Lambda: [780 830]
>          SrcPos: [0 0 0]
>          DetPos: [2 0 0]
>           nSrcs: 1
>           nDets: 1
>        MeasList: [2x4 double]
>            xmin: -1
>            xmax: 3
>            ymin: -1
>            ymax: 1
>     MeasListAct: [2x1 double]
>     MeasListVis: [2x1 double]
>
> -----Original Message-----
>>From: Meryem Ayse Yucel <mayucel at nmr.mgh.harvard.edu>
>>Sent: Oct 19, 2012 11:04 AM
>>To: austin1 <astoudenmire at earthlink.net>, homer-users at nmr.mgh.harvard.edu
>>Cc: homer-users at nmr.mgh.harvard.edu
>>Subject: Re: [Homer-users] Simultaneous display of raw data and stimulus
>> condition
>>
>>Does the size of your s matrix (X,A) match with the size of your d matrix
>>(X,B) in your  .nirs file? Do you see any error message on matlab command
>>window after you click?
>>
>>Meryem
>>
>>
>>>
>>> When I check the box I get the stimulus marks but the data goes away.
>>>
>>>
>>> -----Original Message-----
>>>>From: Meryem Ayse Yucel <mayucel at nmr.mgh.harvard.edu>
>>>>Sent: Oct 18, 2012 2:56 PM
>>>>To: austin1 <astoudenmire at earthlink.net>,
>>>> homer-users at nmr.mgh.harvard.edu
>>>>Cc: homer-users at nmr.mgh.harvard.edu
>>>>Subject: Re: [Homer-users] Simultaneous display of raw data and
>>>> stimulus
>>>> condition
>>>>
>>>>Hi Austin
>>>>
>>>>There is a small checkbox at the lower corner of the plot area in the
>>>> GUI.
>>>>If it is checked you will see the stim marks, however you should have
>>>> an
>>>> s
>>>>matrix in your .nirs file.
>>>>
>>>>Meryem
>>>>
>>>>
>>>>
>>>>> <HEAD>
>>>>> <STYLE>body{font-size:10pt;font-family:arial,sans-serif;background-color:#ffffff;color:black;}p{margin:0px;}</STYLE>
>>>>>
>>>>> <META content="MSHTML 6.00.6000.17114" name=GENERATOR></HEAD>
>>>>> <BODY>
>>>>> <P><FONT color=#000000><FONT size=2><FONT face=arial,sans-serif>Is
>>>>> there a
>>>>> way to show the plot of raw data (or OD, etc.) at the same time the
>>>>> stimulus condition is plotted?</FONT></FONT></FONT></P>
>>>>> <P><FONT color=#000000><FONT size=2><FONT
>>>>> face=arial,sans-serif>Thanks!</FONT></FONT></FONT></P>
>>>>> <P><FONT color=#000000><FONT size=2><FONT
>>>>> face=arial,sans-serif>Austin<BR></P></FONT></FONT></FONT></BODY>
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>>
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