[Homer-users] Homer-users Digest, Vol 49, Issue 3

Fri Dec 27 12:04:30 EST 2013

I have been able to use Homer2 with 2013b. No other additions have been added to MATLAB.
________________________________________
From: homer-users-bounces at nmr.mgh.harvard.edu <homer-users-bounces at nmr.mgh.harvard.edu> on behalf of homer-users-request at nmr.mgh.harvard.edu <homer-users-request at nmr.mgh.harvard.edu>
Sent: Friday, December 20, 2013 10:44 AM
To: homer-users at nmr.mgh.harvard.edu
Subject: Homer-users Digest, Vol 49, Issue 3

Send Homer-users mailing list submissions to
        homer-users at nmr.mgh.harvard.edu

To subscribe or unsubscribe via the World Wide Web, visit
        https://mail.nmr.mgh.harvard.edu/mailman/listinfo/homer-users
or, via email, send a message with subject or body 'help' to
        homer-users-request at nmr.mgh.harvard.edu

You can reach the person managing the list at
        homer-users-owner at nmr.mgh.harvard.edu

When replying, please edit your Subject line so it is more specific
than "Re: Contents of Homer-users digest..."

Today's Topics:

   1. Re: Error starting HOMER2 with MATLAB 2013b (David Boas)
   2. Re: Error starting HOMER2 with MATLAB 2013b (Ian Wiggins)

----------------------------------------------------------------------

Message: 1
Date: Fri, 20 Dec 2013 10:30:07 -0500
From: David Boas <dboas at nmr.mgh.harvard.edu>
Subject: Re: [Homer-users] Error starting HOMER2 with MATLAB 2013b
To: homer-users at nmr.mgh.harvard.edu
Message-ID: <52B4627F.10409 at nmr.mgh.harvard.edu>
Content-Type: text/plain; charset="iso-8859-1"

hmmm.... we haven't used Homer2 with the newest matlab yet. Maybe they
changed the arguments for the waitbar command. Sounds like matlab to
destroy backward compatibility.

Does anyone else out there have matlab 2013b? Can you verify if they
changed the waitbar arguments?

Thanks
David

On 12/18/13 11:13 PM, Paschall, Dwayne wrote:
> Good evening. I am int he process of trying (again) to install HOMER2.
> I am using MATLAB version 2013b and have all the required toolboxes
> installed that are indicated on the information page. However, when I
> type >>Homer2_UI at the MATLAB command prompt, I receive the following
> errors:
>
> Error using waitbar
> Too many input arguments.
>
> Error in checkNIRSFormat (line 13)
>     waitbar(iF/nFiles,hwait,sprintf('Checking file %d of %d',iF,nFiles));
>
> Error in getNIRSFileErrors (line 15)
> flags = checkNIRSFormat(files);
>
> Error in GetNIRSDataSet (line 67)
> [files filesErr] = getNIRSFileErrors(files);
>
> Error in EasyNIRS>EasyNIRS_OpeningFcn (line 67)
> files = GetNIRSDataSet(handles);
>
> Error in gui_mainfcn (line 221)
>     feval(gui_State.gui_OpeningFcn, gui_hFigure, [], guidata(gui_hFigure),
>     varargin{:});
>
> Error in EasyNIRS (line 43)
>     gui_mainfcn(gui_State, varargin{:});
>
> Error in Homer2_UI (line 3)
> EasyNIRS();
>
> I have HOMER2 in my MATLAB path (first set of directories). Can anyone
> provide some insight here into what is needed to change in order to
> get it up and going? Many thanks in advance.
>
> cheers,
> Dwayne
> ==============================
> Dwayne Paschall, Ph.D.
> Assoc. Professor
> TTUHSC
>
> http://dwaynepaschall.com
> Twitter: @DrP_Insights
>
>
>
> _______________________________________________
> Homer-users mailing list
> Homer-users at nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/homer-users

-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mail.nmr.mgh.harvard.edu/pipermail/homer-users/attachments/20131220/335b794d/attachment-0001.html

------------------------------

Message: 2
Date: Fri, 20 Dec 2013 15:42:56 +0000
From: Ian Wiggins <Ian.Wiggins at nottingham.ac.uk>
Subject: Re: [Homer-users] Error starting HOMER2 with MATLAB 2013b
To: "homer-users at nmr.mgh.harvard.edu"
        <homer-users at nmr.mgh.harvard.edu>
Message-ID:
        <BEE8286F7761EC49B861DFF6B1A031D3282D20A22D at EXCHANGE2.ad.nottingham.ac.uk>

Content-Type: text/plain; charset="us-ascii"

Running 2013b here (8.2.0.701, Windows 32-bit) - Homer2 seems to be running fine (Developer's version).

Dwayne, have you tried 'which waitbar' in the Matlab command window? Is it possible you have some 3rd party toolbox installed that has overridden Matlab's built-in waitbar function?

Best wishes

Ian

From: homer-users-bounces at nmr.mgh.harvard.edu [mailto:homer-users-bounces at nmr.mgh.harvard.edu] On Behalf Of David Boas
Sent: 20 December 2013 15:30
To: homer-users at nmr.mgh.harvard.edu
Subject: Re: [Homer-users] Error starting HOMER2 with MATLAB 2013b

hmmm.... we haven't used Homer2 with the newest matlab yet. Maybe they changed the arguments for the waitbar command. Sounds like matlab to destroy backward compatibility.

Does anyone else out there have matlab 2013b? Can you verify if they changed the waitbar arguments?

Thanks
David

On 12/18/13 11:13 PM, Paschall, Dwayne wrote:
Good evening. I am int he process of trying (again) to install HOMER2. I am using MATLAB version 2013b and have all the required toolboxes installed that are indicated on the information page. However, when I type >>Homer2_UI at the MATLAB command prompt, I receive the following errors:

Error using waitbar
Too many input arguments.

Error in checkNIRSFormat (line 13)
    waitbar(iF/nFiles,hwait,sprintf('Checking file %d of %d',iF,nFiles));

Error in getNIRSFileErrors (line 15)
flags = checkNIRSFormat(files);

Error in GetNIRSDataSet (line 67)
[files filesErr] = getNIRSFileErrors(files);

Error in EasyNIRS>EasyNIRS_OpeningFcn (line 67)
files = GetNIRSDataSet(handles);

Error in gui_mainfcn (line 221)
    feval(gui_State.gui_OpeningFcn, gui_hFigure, [], guidata(gui_hFigure),
    varargin{:});

Error in EasyNIRS (line 43)
    gui_mainfcn(gui_State, varargin{:});

Error in Homer2_UI (line 3)
EasyNIRS();

I have HOMER2 in my MATLAB path (first set of directories). Can anyone provide some insight here into what is needed to change in order to get it up and going? Many thanks in advance.

cheers,
Dwayne
==============================
Dwayne Paschall, Ph.D.
Assoc. Professor
TTUHSC

http://dwaynepaschall.com

Twitter: @DrP_Insights

_______________________________________________

Homer-users mailing list

Homer-users at nmr.mgh.harvard.edu<mailto:Homer-users at nmr.mgh.harvard.edu>

https://mail.nmr.mgh.harvard.edu/mailman/listinfo/homer-users

This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please send it back to me, and immediately delete it.   Please do not use, copy or disclose the information contained in this message or in any attachment.  Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham.

This message has been checked for viruses but the contents of an attachment

may still contain software viruses which could damage your computer system, you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mail.nmr.mgh.harvard.edu/pipermail/homer-users/attachments/20131220/fdb1deeb/attachment.html

------------------------------

_______________________________________________
Homer-users mailing list
Homer-users at nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/homer-users

End of Homer-users Digest, Vol 49, Issue 3
******************************************

The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.