[Homer-users] Problems in opening Simple_Probe.nirs

[Marco Montalto]

Thanks Meryem for your reply. I did as you advised and I can only see on variable: SD


On 04 Mar 2013, at 20:42, "Meryem Ayse Yucel" <mayucel at nmr.mgh.harvard.edu> wrote:

> Can you try loading your .nirs file in Matlab directly and see if you
> actually have d, s etc?
> 
> load Simple_Probe.nirs -mat
> 
> 
> 
> Meryem
> 
>> Dear List,
>> 
>> I am trying to upload the sample data file (Simple_Probe.nirs) in Homer2
>> but keep getting the following error message:
>> 
>> Warning: Variable 'd' not found.
>>> In checkNIRSFormat at 15
>>  In getNIRSFileErrors at 8
>>  In GetNIRSDataSet at 32
>>  In EasyNIRS>EasyNIRS_OpeningFcn at 67
>>  In gui_mainfcn at 221
>>  In EasyNIRS at 43
>>  In Homer2_UI at 3
>> Warning: Variable 't' not found.
>>> In checkNIRSFormat at 15
>>  In getNIRSFileErrors at 8
>>  In GetNIRSDataSet at 32
>>  In EasyNIRS>EasyNIRS_OpeningFcn at 67
>>  In gui_mainfcn at 221
>>  In EasyNIRS at 43
>>  In Homer2_UI at 3
>> Warning: Variable 's' not found.
>>> In checkNIRSFormat at 15
>>  In getNIRSFileErrors at 8
>>  In GetNIRSDataSet at 32
>>  In EasyNIRS>EasyNIRS_OpeningFcn at 67
>>  In gui_mainfcn at 221
>>  In EasyNIRS at 43
>>  In Homer2_UI at 3
>> Warning: Variable 'aux' not found.
>>> In checkNIRSFormat at 15
>>  In getNIRSFileErrors at 8
>>  In GetNIRSDataSet at 32
>>  In EasyNIRS>EasyNIRS_OpeningFcn at 67
>>  In gui_mainfcn at 221
>>  In EasyNIRS at 43
>>  In Homer2_UI at 3
>> Warning: Variable 'procInput' not found.
>>> In checkNIRSFormat at 15
>>  In getNIRSFileErrors at 8
>>  In GetNIRSDataSet at 32
>>  In EasyNIRS>EasyNIRS_OpeningFcn at 67
>>  In gui_mainfcn at 221
>>  In EasyNIRS at 43
>>  In Homer2_UI at 3
>> ??? Reference to non-existent field 'errCoun'.
>> 
>> Error in ==> getNIRSFileErrors at 16
>>        flags(iF).errCount = flags(iF).errCoun+1;
>> 
>> Error in ==> GetNIRSDataSet at 32
>> [files filesErr] = getNIRSFileErrors(files);
>> 
>> Error in ==> EasyNIRS>EasyNIRS_OpeningFcn at 67
>> [files pathnm] = GetNIRSDataSet(handles);
>> 
>> Error in ==> gui_mainfcn at 221
>>    feval(gui_State.gui_OpeningFcn, gui_hFigure, [], guidata(gui_hFigure),
>> varargin{:});
>> 
>> Error in ==> EasyNIRS at 43
>>    gui_mainfcn(gui_State, varargin{:});
>> 
>> Error in ==> Homer2_UI at 3
>> EasyNIRS();
>> 
>> I am using Matlab R2011a Student Version running on a Macbook Pro Intel
>> Core 2 Duo (OS X Version 10.8.2)
>> 
>> Would anyone be able to pinpoint the mistake/s I am doing when trying to
>> upload this file?
>> 
>> Thanks and regards,
>> Marco
>> _______________________________________________
>> Homer-users mailing list
>> Homer-users at nmr.mgh.harvard.edu
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/homer-users
>> 
>> 
>> 
> 
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