[Homer-users] Question about AltlasViewerGUI 2

[David Boas]

This issue with the MNI coordinates exists in the v2.0 package release.

We have fixed it in the developer’s version that you can get from svn at https://www.nitrc.org/projects/homer2/

It will appear in the next package release as well.




> On May 15, 2015, at 12:19 PM, Xiaosu Hu <xiaosuhu at umich.edu> wrote:
> 
> Thank you so much, David! 
> 
> I have one more question, I want to put the MNI coordinates provided by the Atlasviewer into some online MRI database to look up the Broadmann information, but I found those MNI coordinates are not the typical ones (too large and no negative value). Could you tell me how to translate the Atlasviewer MNI coordinates into standard MNI coordinates?
> 
> Thanks again!
> 
> Frank
> 
> On Fri, May 15, 2015 at 7:49 AM, David Boas <dboas at nmr.mgh.harvard.edu <mailto:dboas at nmr.mgh.harvard.edu>> wrote:
> We agree. This is on the list of features to add to AtlasViewer!
> 
> We’ll let you know when it has been added.
> 
> 
> 
> 
>> On May 14, 2015, at 4:05 PM, Xiaosu Hu <xiaosuhu at umich.edu <mailto:xiaosuhu at umich.edu>> wrote:
>> 
>> Hi All,
>> 
>> I am using the AtlasViewerGUI 2 for fNIRS registration. But when I project the channels onto the cortex I can only get the brain region information (e.g. frontal lobe, parietal lobe, etc.). 
>> 
>> It will be very helpful if I can get the Broadmann area information as well, does anybody know is there a way to do that?
>> 
>> I appreciate your help!
>> 
>> Best,
>> 
>> Frank
>> 
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