[Mne_analysis] outer skull creation

Jeff Eriksen eriksenj at ohsu.edu
Mon Nov 21 20:36:25 EST 2011
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-Jeff

From: Jeff Eriksen <jefferiksen at gmail.com<mailto:jefferiksen at gmail.com>>
Date: Mon, 21 Nov 2011 17:34:12 -0800
To: "mne_analysis at nmr.mgh.harvard.edu<mailto:mne_analysis at nmr.mgh.harvard.edu>" <mne_analysis at nmr.mgh.harvard.edu<mailto:mne_analysis at nmr.mgh.harvard.edu>>
Subject: [Mne_analysis] outer skull creation

To MNE support:

I am trying to create the BEM mesh for use in MNE. I am working solely with EEG data, so have not access to seglab. Nor do I have the special multiecho FLASH images. I have tried watershed first, but the outer skull surface it gives is not useable, including most of the throat and neck volume.

Thus it seems I must try the BrainSuite program. Before I do so, has anyone any experience like mine where FreeSurfer's watershed fails to get a good outer skull? Do I have any hope with BrainSuite if FSrfr failed?

Thanks,
-Jeff

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