[Mne_analysis] Functional labels for MNE

Eric Larson larson.eric.d at gmail.com
Wed Oct 17 12:01:14 EDT 2012
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Yeah, it must be some oddity with Freesurfer. We've been doing recon --all
with Freesurfer x86_64 5.1.0 and our subjects have lh.BA.annot. If you
figure it out, let us know!

Eric


On Wed, Oct 17, 2012 at 2:52 AM, Alexandre Gramfort <
gramfort at nmr.mgh.harvard.edu> wrote:

> ok then I don't know. I would ask the question on the freesurfer mailing
> list.
>
> Alex
>
> On Wed, Oct 17, 2012 at 11:50 AM, ffmpeg ffmpeg <platon7pronko at gmail.com>
> wrote:
> > I used
> >
> > recon-all -i $(ls | head -1) -s $SUBJECT
> > recon-all -autorecon-all -s $SUBJECT
> >
> > where $(ls | head -1) is the first image file.
> >
> > Docs for recon-all state that "-autorecon-all" is the same as "-all", so
> > that doesn't seem to be a problem.
> >
> > 2012/10/17 Alexandre Gramfort <gramfort at nmr.mgh.harvard.edu>
> >>
> >> > And how can I obtain those files (lh.BA.annot)?
> >>
> >> you should have it if you used :
> >>
> >> recon-all -all …
> >>
> >> at least I have it for all my subjects
> >>
> >> Alex
> >>
> >>
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