[Mne_analysis] AttributeError: 'ICA' object has no attribute 'plot_properties'

[Maria Hakonen]

Thank you for the answers!

The example script seems to work correctly with mne 0.14.1 and
matplotlib 1.5.1. If I use matplotlib 2.0.0, the black outlines of the
columns are missing in the figure "ICA component scores" (i.e. there is
only a red column).

Best,
Maria

2017-07-25 12:26 GMT+03:00 Mikołaj Magnuski <mmagnuski at swps.edu.pl>:

> Another possibility is that you did not restart python/notebook after
> updating mne.
>
> 25.07.2017 10:26 "Ort, E." <e.ort at vu.nl> napisał(a):
>
>> It seems like you have two versions of mne installed on your system. One
>> via pip and another one with some other method, with the latter being found
>> before the latest one. If you check:
>>
>> import mne
>> print(mne.__path__)
>>
>> you can see where you import your mne from. Assuming that you don't need
>> that older version, you could simply remove it from your system, and the
>> next time you import mne, python should only find the newest version.
>>
>> Eduard
>> ________________________________________
>> From: mne_analysis-bounces at nmr.mgh.harvard.edu [
>> mne_analysis-bounces at nmr.mgh.harvard.edu] on behalf of Hakonen Maria [
>> maria.hakonen at aalto.fi]
>> Sent: 25 July 2017 08:59
>> To: Discussion and support forum for the users of MNE Software
>> Subject: Re: [Mne_analysis] AttributeError: 'ICA' object has no
>> attribute       'plot_properties'
>>
>> print(mne.__version__) gives 0.11.dev0.
>>
>> Python and conda versions are:
>> Python 2.7.13 :: Anaconda 4.3.0 (64-bit)
>> conda 4.3.21
>>
>> I tried:
>> pip install --user mne --upgrade
>>
>> Which gives:
>> Collecting mne
>> Installing collected packages: mne
>> Successfully installed mne-0.14.1
>>
>> However, print(mne.__version__) still gives 0.11.dev0, and I am also
>> getting the same error.
>>
>> Best,
>> Maria
>>
>>
>> ________________________________________
>> Lähettäjä: mne_analysis-bounces at nmr.mgh.harvard.edu <
>> mne_analysis-bounces at nmr.mgh.harvard.edu> käyttäjän Mikołaj Magnuski <
>> mmagnuski at swps.edu.pl> puolesta
>> Lähetetty: 24. heinäkuuta 2017 23:01:52
>> Vastaanottaja: Discussion and support forum for the users of MNE Software
>> Aihe: Re: [Mne_analysis] AttributeError: 'ICA' object has no attribute
>> 'plot_properties'
>>
>> Your mne version might be too old - can you check:
>> import mne
>> print(mne.__version__)
>>
>> 24.07.2017 20:31 "Maria Hakonen" <maria.hakonen at gmail.com<mailto:
>> maria.hakonen at gmail.com>> napisał(a):
>> Dear mne experts,
>>
>> I have tried to run the example "Artifact Correction with ICA":
>> https://martinos.org/mne/stable/auto_tutorials/plot_artifact
>> s_correction_ica.html?highlight=ica
>>
>> I have also used the same data as is used in the example.
>>
>> However, I am getting the following error:
>>
>> AttributeError                            Traceback (most recent call
>> last)
>> /scratch/nbe/braindata/mhhakone/intell/TaskIII/coherence-analysis/test-ica.py
>> in <module>()
>>      56 plt.close()
>>      57
>> ---> 58 ica.plot_properties(eog_epochs, picks=eog_inds,
>> psd_args={'fmax': 35.},
>>      59                     image_args={'sigma': 1.})
>>      60
>>
>> AttributeError: 'ICA' object has no attribute 'plot_properties'
>>
>> ica is as follows:
>>
>> <ICA  |  raw data decomposition, fit (fastica): 13635 samples, 25
>> components, channels used: "mag"; "grad">
>>
>> Could someone please let me know what might be wrong?
>>
>> Best regards,
>> Maria
>>
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