[Mne_analysis] Export mixed source space to nifti

[Eric Larson]

In the meantime, the code necessary to put a surface source estimate into a
NIfTI volume is in a work-in-progress pull request here:

https://github.com/mne-tools/mne-python/pull/4496/files#diff-c38906291c7d4fa5e1df2d494b9c27d2R129

Eric


On Thu, Dec 14, 2017 at 7:40 AM, Alexandre Gramfort <
alexandre.gramfort at inria.fr> wrote:

> Dear Lori,
>
> presently in MNE there is no function to export a surface activation
> to a volume.
>
> mri_surf2vol in freesurfer would be my approach but it would need
> the high resolution activation as input.
>
> please open an issue at : https://github.com/mne-tools/mne-python/issues
>
> so you know when we implement this.
>
> Best,
> Alex
>
> On Wed, Dec 13, 2017 at 11:02 PM, Lori Sanfratello <lsanfratello at mrn.org>
> wrote:
> > Hello, can't find a way to do this.  Found an old thread that talks about
> > "updated MixedSourceEstimate.export_volumes_to_nifti to include an
> option to
> > export the surface activations as well" at
> > https://github.com/mne-tools/mne-python/pull/1462 . However, I can't
> find
> > documentation on using it, and it doesn't work if I try to use it
> > (AttributeError: 'MixedSourceEstimate' object has no attribute
> > 'export_volumes_to_nifti').  Any help would be appreciated. Thanks, Lori
> >
> > --
> > Dr. L. Sanfratello, PhD
> > Assistant Professor of Trans. Neuroscience
> > The Mind Research Network,
> > 1101 Yale Blvd NE
> > Albuquerque, NM 87106
> > 505 272-5557
> >
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