[Mne_analysis] Too Many Neighbors Head Model Error

[Eric Larson]

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Can you try running it with "--force" to skip topology checks?

Eric

On Mon, Jul 23, 2018 at 10:38 AM Rockhill, Alexander P. <
AROCKHILL at mgh.harvard.edu> wrote:

> Hi all,
>
>     I am getting this error copied below. Since I am just using the head
> model for coregistration, it is not essential it not have any
> imperfections. So is there a way preferably to get the error not to occur
> or if not bypass the error?
>
> [karima:New_ARC] (nmr-stable60-env) mne_surf2bem --surf
> $karima3/New_ARC/$SUBJECT/surf/lh.seghead --id 4 --fif $SUBJECT-head.fif
>
> mne_surf2bem version 1.8 compiled at Apr 26 2016 04:21:49
>
> input  file #   1 :
> /autofs/space/karima_003/users/New_ARC/hc007/surf/lh.seghead / id = 4 /
> sigma N/A
> output file       : hc007-head.fif
>
> New quad file : nvert = 202644 nquad = 203745
>     Triangle and vertex normals and neighboring triangles...[done]
>     Vertex neighbors...Too many neighbors for vertex 91780.
>
>
> Thanks,
>
> Alex
>
>
> Translational NeuroEngineering Laboratory
> Division of Neurotherapeutics, Department of Psychiatry
> Massachusetts General Hospital, Martinos Center
> 149 13th St Charlestown #2301, Boston, MA 02129
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