[Mne_analysis] Cross-frequency coupling

[Maryam Zolfaghar]

        External Email - Use Caution        

Thank you, Alex. It was very helpful.

I have one more question: *raw_to_mask *and *Comodulogram* work on raw
data. I am wondering if there is any function that can also work with
epochs?
Similar to the "phase_amplitude_coupling" in the sandbox that gets an
instance of Raw or Epochs as an input.

Thank you,
-Mary

On Sun, Apr 14, 2019 at 12:48 PM Alexandre Gramfort <
alexandre.gramfort at inria.fr> wrote:

>         External Email - Use Caution
>
> hi Mary,
>
> you may want to have a look at : https://pactools.github.io/
> it works with mne and implements a number of CFC metric
> including the DAR approach we published in 2017 [0]
>
> The DAR method has the unique ability to offer a builtin
> way to set parameters (filtering parameters such as band
> width). It uses cross-validation and likelihood evaluation
> on left-out data to report (or not) the presence of CFC.
>
> Let us know if you meet any difficulty with this software.
>
> hope this helps,
>
> Alex
>
> [0]
> https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005893
>
> On Sun, Apr 14, 2019 at 7:16 PM Maryam Zolfaghar
> <Maryam.Zolfaghar at colorado.edu> wrote:
> >
> >         External Email - Use Caution
> >
> > Hi all,
> >
> > I am wondering whether there are any functions in MNE for the
> cross-frequency coupling? I only found the following link but it is not in
> the official MNE-Python package yet.
> >
> >
> https://github.com/mne-tools/mne-sandbox/blob/master/examples/connectivity/plot_pac.py
> >
> >
> > Thanks,
> > -Mary
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