dear FS community:
now i have more than 200 subjects which already finished recon-all with 5.3, since 6.0 released, i wonder should i re-run them with 6.0 as lots of changes like different surf-map and registration. i ran a bit of them as test and i found the pial problems were more than 5.3, and it seems some subcortical structures were vanished in the brainmask.mgz, though the aseg.mgz looked good.
i wanna ask is my problem serious or it is usual with 6.0, and which version you think is better for cortical volume and surface thickness reserch?
best regards
weiwei
west china hospital
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