Freesurfer November 2020

freesurfer@nmr.mgh.harvard.edu

107 participants
149 discussions

Re: [Freesurfer] Tracula error: run list is longer than subject list
by Yendiki, Anastasia 04 Nov '20

04 Nov '20

What goes after "-c" in the trac-all command should be the configuration file, not the nifti file. ________________________________ From: Shanika Jayakody <shanika.jayakody(a)einsteinmed.org> Sent: Monday, October 26, 2020 5:01 PM To: Yendiki, Anastasia <AYENDIKI(a)mgh.harvard.edu> Subject: Fw: Tracula error: run list is longer than subject list External Email - Use Caution Hi Anastasia Thanks for your reply. That file was a Dicom but it was named as "IM_0017". Anyways I tried with the extension (renamed the file too as IM_007.dcm) Just to see if there is a different outcome, I ran trac-all on another subject too but still I get the same error. I have two things to double check with you 1) our pre-processed files are nii, not dcm-I have changed the configuration file, bvals and bvec files as instructed in FreeSurfer wiki (attached) and did trac-all- this way the first error I get is illigal variable name. I am not sure if nii files won't work or if there is something wrong with my configuration file. 2) I ran trac-all on the same subjects dicom files (changed the configuration file accordingly) Either way I get the same error (log file attached). It would be really great if you can suggest something-looking forward to hear from you. Many thanks, Oshadi ________________________________ From: freesurfer-bounces(a)nmr.mgh.harvard.edu <freesurfer-bounces(a)nmr.mgh.harvard.edu> on behalf of Yendiki, Anastasia <AYENDIKI(a)mgh.harvard.edu> Sent: Monday, October 26, 2020 11:05 AM To: Freesurfer support list <freesurfer(a)nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Tracula error: run list is longer than subject list Hi Oshadi - The first error in your log file is this: ERROR: cannot find /home/admin/freesrufer/subjects/30141/30141Diffusion/IM_0017 Does that file exist? Does the file name have an extension that you're omitting? Best, Anastasia. ________________________________ From: freesurfer-bounces(a)nmr.mgh.harvard.edu <freesurfer-bounces(a)nmr.mgh.harvard.edu> on behalf of Shanika Jayakody <shanika.jayakody(a)einsteinmed.org> Sent: Monday, October 26, 2020 10:06 AM To: Freesurfer support list <freesurfer(a)nmr.mgh.harvard.edu>; Yendiki, Anastasia <AYENDIKI(a)mgh.harvard.edu> Subject: [Freesurfer] Fw: Tracula error: run list is longer than subject list External Email - Use Caution Hi Anastasia Thanks again for helping with troubleshooting the error- I was wondering if you have any suggestions for me to try. I have also tried running TRACULA on freesurfer tutorial data but get the same error Best regards, Oshadi ________________________________ From: freesurfer-bounces(a)nmr.mgh.harvard.edu <freesurfer-bounces(a)nmr.mgh.harvard.edu> on behalf of Shanika Jayakody <shanika.jayakody(a)einsteinmed.org> Sent: Tuesday, October 20, 2020 9:56 AM To: Freesurfer support list <freesurfer(a)nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Tracula error: run list is longer than subject list CAUTION: This email comes from an external source; the attachments and/or links may compromise our secure environment. Do not open or click on suspicious emails. Please click on the “Phish Alert” button on the top right of the Outlook dashboard to report any suspicious emails. External Email - Use Caution Hi Anastasia Thanks for your reply. It was subjlist (sorry that was a typo in my email) I have attached the 1) log file 2) cognfiuration file 3) bvec and bval files I have used. I hope that's what you need- I am very new to FreeSurfer please let me know if you want me to send any more files. Thank you for your help Best regards Oshadi ________________________________ From: freesurfer-bounces(a)nmr.mgh.harvard.edu <freesurfer-bounces(a)nmr.mgh.harvard.edu> on behalf of Yendiki, Anastasia <AYENDIKI(a)mgh.harvard.edu> Sent: Monday, October 19, 2020 8:33 PM To: freesurfer(a)nmr.mgh.harvard.edu <freesurfer(a)nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Tracula error: run list is longer than subject list Make sure to use "subjlist", not "sublist". If that is not the issue, then please attach your log file and configuration file - it's hard to guess the issue without more information. Best, Anastasia. ________________________________ From: freesurfer-bounces(a)nmr.mgh.harvard.edu <freesurfer-bounces(a)nmr.mgh.harvard.edu> on behalf of Shanika Jayakody <shanika.jayakody(a)einsteinmed.org> Sent: Monday, October 19, 2020 2:43 PM To: freesurfer(a)nmr.mgh.harvard.edu <freesurfer(a)nmr.mgh.harvard.edu> Subject: [Freesurfer] Tracula error: run list is longer than subject list External Email - Use Caution Hello, I have been trying to run trac-all on a DWI of a participant, but I keep getting the error "run list is longer than subject list" I have created a configuration file setting sublist and runlist to just one subject so I am not sure what the error is about. I wonder if anyone can help me figure out a solution. Many thanks Oshadi

2 8

Tracula error
by Michele Valotti 02 Nov '20

02 Nov '20

External Email - Use Caution Hello all, I am trying to run Tracula for one of my subjects and after creating the configuration file I run trac-all -prep -c /path/to/config/file but I am getting this error: FSLDIR: Undefined variable. I have run the SetUpFreeSurfer.sh script and echo $FSLDIR prints my fls directory. Adding export FSLDIR=/my/fls/path also does not fix the error, Any suggestions? Thank you very much, Michele

2 1

mri_convert error
by Georgina Angelopoulou 02 Nov '20

02 Nov '20

External Email - Use Caution Dear Freesurfer Developers, Apologies for double posting. I am attempting to convert some dicom files to mgz via mri_convert command. However, for only 5 participants from my cohort I get the following error. Could you please help me to resolve the problem? Thank you in advance, Georgina (base) Georgias-MBP:HC21 georgina$ mri_convert 1.3.46.670589.11.38127.5.0.4944.2019102316491068177.dcm 001.mgz mri_convert.bin 1.3.46.670589.11.38127.5.0.4944.2019102316491068177.dcm 001.mgz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from 1.3.46.670589.11.38127.5.0.4944.2019102316491068177.dcm... Starting DICOMRead2() dcmfile = /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491068177.dcm dcmdir = /Users/georgina/Downloads/HD/HC21 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491068177.dcm break DICOMRead.c:5228 Ref Series No = 201 Found 172 files, checking for dicoms ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490976021.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490977022.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490977023.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490978024.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490978025.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490979026.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490980027.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490980028.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490981029.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490982030.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490983031.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490983032.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490984033.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490985034.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490985035.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490986036.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490986037.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490986038.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490987039.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490988040.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490992041.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490992042.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490993043.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490993044.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490994045.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490994046.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490995047.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490995048.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490996049.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490996050.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490997051.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490997052.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490998053.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490998054.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490999055.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490999056.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491000057.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491000058.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491001059.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491001060.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491002061.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491002062.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491003063.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491003064.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491004065.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491004066.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491005067.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491006068.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491007069.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491007070.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491008071.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491008072.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491009073.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491009074.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491010075.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491010076.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491011077.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491011078.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491012079.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491013080.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491014081.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491014082.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491015083.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491015084.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491016085.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491016086.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491017087.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491017088.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491018089.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491018090.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491019091.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491019092.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491020093.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491020094.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491021095.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491021096.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491022097.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491023098.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491023099.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491024100.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491024101.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491025102.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491025103.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491026104.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491027105.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491027106.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491028107.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491028108.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491029109.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491029110.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491030111.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491031112.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491031113.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491032114.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491032115.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491033116.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491034117.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491034118.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491035119.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491036120.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491036121.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491037122.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491037123.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491038124.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491038125.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491039126.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491039127.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491041128.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491041129.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491042130.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491043131.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491043132.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491044133.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491044134.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491045135.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491045136.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491046137.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491046138.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491047139.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491048140.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491048141.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491049142.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491049143.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491050144.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491050145.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491051146.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491051147.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491052148.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491052149.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491053150.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491054151.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491054152.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491055153.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491055154.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491056155.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491056156.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491057157.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491057158.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491058159.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491058160.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491059161.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491060162.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491060163.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491061164.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491061165.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491062166.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491062167.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491063168.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491063169.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491064170.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491064171.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491065172.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491065173.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491066174.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491066175.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491067176.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491068177.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491068178.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491069179.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491069180.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491070181.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491070182.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491071183.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491072184.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491072185.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491074186.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491074187.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491075188.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491075189.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491076190.dcm break DICOMRead.c:5228 Found 170 dicom files in series. ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490976021.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490977022.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490977023.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490978024.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490978025.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490979026.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490980027.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490980028.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490981029.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490982030.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490983031.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490983032.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490984033.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490985034.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490985035.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490986036.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490986037.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490986038.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490987039.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490988040.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490992041.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490992042.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490993043.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490993044.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490994045.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490994046.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490995047.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490995048.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490996049.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490996050.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490997051.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490997052.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490998053.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490998054.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490999055.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490999056.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491000057.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491000058.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491001059.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491001060.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491002061.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491002062.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491003063.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491003064.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491004065.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491004066.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491005067.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491006068.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491007069.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491007070.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491008071.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491008072.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491009073.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491009074.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491010075.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491010076.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491011077.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491011078.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491012079.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491013080.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491014081.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491014082.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491015083.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491015084.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491016085.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491016086.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491017087.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491017088.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491018089.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491018090.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491019091.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491019092.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491020093.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491020094.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491021095.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491021096.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491022097.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491023098.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491023099.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491024100.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491024101.dcm break DICOMRead.c:5228 ERROR: GetDICOMInfo(): dcmGetDWIParams() 9 DICOM File: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316491025102.dcm break DICOMRead.c:5228 First Sorting Computing Slice Direction Vs: -0.99478 0.102 0.0033 Vs: -0.994779 0.102 0.0033 Second Sorting IsDWI = 0, IsPhilipsDWI = 0 Counting frames nframes = 1 nslices = 82 ndcmfiles = 82 PE Dir = (dicom read) CTABreadASCII(/Applications/freesurfer/FreeSurferColorLUT.txt): could not open file Too many open files ERROR: reading /Applications/freesurfer/FreeSurferColorLUT.txt Loading pixel data ERROR: /Users/georgina/Downloads/HD/HC21/1.3.46.670589.11.38127.5.0.4944.2019102316490992042.dcm is not a dicom file 70092 Requested element (18 9089) not found in DCM_GetElementVM

1 0

mri_convert error
by Georgina Angelopoulou 02 Nov '20

02 Nov '20

1 0

BIDS-ASL request for comments - closes on Friday (Nov 13th) {Disarmed}
by Franklin Feingold 02 Nov '20

02 Nov '20

External Email - Use Caution The BIDS community is preparing to merge the ASL (Arterial Spin Labeling) extension. The updated draft is available for review at: https://secure-web.cisco.com/1t4ZzOsfsvFPLRNF1xylkG0C9rf6FgtaTu4o9Dl7kHsW-t…, and comments and suggestions may be submitted on GitHub at: https://secure-web.cisco.com/1t-cwOKt3nXAzHIaWkuGHBb65JPjrqfPcOYnnZQEzarKcv…. The community review will close on Friday (Nov 13th) at 11:59pm PT (pacific time) This BIDS extension seeks to establish how ASL data and additional metadata are organized within the BIDS structure. This encompasses the ASL sequences provided in the consensus paper [Alsop 2014], including single- and multi-time point pulsed and (pseudo)-continuous ASL. The final review entails a two week period for public commenting, with a possibility of extension for unresolved discussion. Once public comments are concluded, there will be a one week freeze, during which only critical issues will be considered. (For more details on the release protocol, see https://secure-web.cisco.com/1rOmCmEOGynPW9BtbEF5JrCcnOVHiOPW6DHkVog_QFYll7…) We look forward to hearing your feedback! The BIDS Team

1 0

Error in QDEC
by Koustav Chatterjee 02 Nov '20

02 Nov '20

External Email - Use Caution Hello, I have found the following error while click on 'Generate Stats Data Tables' to import the aseg and aparc data from the FreeSurfer-processed group data, Could you please suggest how to overcome the issue? [image: image.png] Thank you, KC

2 1

resolution greater than 1 mm segmentation
by Gonzalo Rojas Costa 02 Nov '20

02 Nov '20

External Email - Use Caution Hi: I know that using an mprage image with greater than 1 mm resolution, freesurfer converts it to 1 mm previous segmentation. There is any option that freesurfer uses the original resolution of the image? Any other software that do such a thing ? Especially hippocampal segmentation. Sincerely, Gonzalo Rojas Costa

2 1

Re: [Freesurfer] Issue with tkregister command
by Douglas N. Greve 02 Nov '20

02 Nov '20

Please remember to post to the list ... Can you run it with --debug as the first option, then post all of the terminal output? On 10/28/2020 11:21 PM, Elisabetta Ambron wrote: > > External Email - Use Caution > > Dear Prof Greve > I am having an issue running reg-feat2anat and I get the following error > > Initializing exf2anat with header > tkregister2_cmdl_cmdl --targ > /Applications/freesurfer/7.1.1/subjects/sub1/mri/brainmask.mgz --mov > BLOCK1_LEFT.feat/example_func.nii.gz --reg > BLOCK1_LEFT.feat/reg/freesurfer/anat2exf.register.dat.init --fslregout > BLOCK1_LEFT.feat/reg/freesurfer/exf2anat.init.fsl.mat --regheader --noedit > tkregister2_cmdl_cmdl: Command not found. > > I saw your answer in > https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg65643.html > <https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg65643.html> > I was not able to download the link because it requires an user and > password. > Could you help me with this issue > Thank you > Best > Elisabetta Ambron

1 0

Re: [Freesurfer] Error during skullstripping: numerical result out of range
by Hye Min Shin 02 Nov '20

02 Nov '20

External Email - Use Caution Hello experts, So I did not see brainmask.mgz in mri folder and it looked like reconall stopped at mri_em_register stage because I couldn't find talairach_with_skull.lt in transforms folder. So I tried running mri_em_register again and got the following error: mri_em_register -skull mri/nu.mgz $FREESURFER_HOME/average/RB_all_withskull_2016-05-10.vc700.gca transforms/talairach_with_skull.lta aligning to atlas containing skull, setting unknown_nbr_spacing = 5 == Number of threads available to mri_em_register for OpenMP = 1 == reading 1 input volumes... logging results to talairach_with_skull.log reading '/usr/local/freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca'... average std = 22.9 using min determinant for regularization = 52.6 0 singular and 9002 ill-conditioned covariance matrices regularized reading 'mri/nu.mgz'... freeing gibbs priors...done. accounting for voxel sizes in initial transform bounding unknown intensity as < 8.7 or > 569.1 total sample mean = 77.6 (1399 zeros) ************************************************ spacing=8, using 3243 sample points, tol=1.00e-05... ************************************************ register_mri: find_optimal_transform find_optimal_transform: nsamples 3243, passno 0, spacing 8 resetting wm mean[0]: 100 --> 108 resetting gm mean[0]: 61 --> 61 input volume #1 is the most T1-like using real data threshold=10.0 skull bounding box = (46, 56, 29) --> (216, 255, 255) using (103, 122, 142) as brain centroid... mean wm in atlas = 108, using box (82,97,114) --> (123, 146,169) to find MRI wm before smoothing, mri peak at 73 robust fit to distribution - 72 +- 7.4 distribution too broad for accurate scaling - disabling WARNING2: gca.c::GCAhistoScaleImageIntensities: h_mri->nbins=100, mri_peak=108 after smoothing, mri peak at 0, scaling input intensities by inf GCAhistoScaleImageIntensities: could not find wm peak Numerical result out of range

1 0

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Freesurfer November 2020