Freesurfer

freesurfer@nmr.mgh.harvard.edu

17 participants
30099 discussions

sulcal depth
by Aleksandar Ristic 15 Jul '14

15 Jul '14

Hi Freesurfer experts, I did thickness group analysis in pts and healthy subject groups in qdec (age corrected( and got thicker cortex in left insula and thinner precentral gyrus bilaterally that survived FDR 0.01 Surface area and curvature analysis found no difference. However, sulcal depth analysis reveled striking difference (positive) in bilateral insula (survived FDR 0.001). As this finding can attribute significantly to understanding of the background of investgated disorder, I kindly ask for representative references covering sulcal depth method (as the variability of the folding patterns is still largely not understood, and different methods have been employed already to best of my knowledge). Second, do I have to correct sulcal depth for age? thanks, Alex Aleksandar J. Ristić, MD, PhD Epilepsy Center Neurology Clinic, Clinical Center of Serbia University of Belgrade, Belgrade - Serbia --- avast! antivirus zaštita je aktivna stoga ova e-pošta nema virusa i zlonamjernih programa. http://www.avast.com

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Is there any saving a brain from this type of error?
by Jonathan Holt 15 Jul '14

15 Jul '14

Attached is an image of wm.mgz after a routine recon-all...

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Re: [Freesurfer] Fw: Re: Problem with uploading Cluster Simulation data
by Douglas N Greve 15 Jul '14

15 Jul '14

You have to load a surface and then load the overlay on top of that. See the freeview tutorial doug ps. Please post to the list! On 07/15/2014 09:03 AM, carina(a)van-vlodrop.de wrote: > I have opened freeview with the commands 'freesurfer' and 'freeview'. > I thought that I could upload the data directly in freeview. Or which > command do I need? > *Gesendet:* Montag, 14. Juli 2014 um 19:38 Uhr > *Von:* "Douglas N Greve" <greve(a)nmr.mgh.harvard.edu> > *An:* "carina(a)van-vlodrop.de" <carina(a)van-vlodrop.de>, > "Freesurfer(a)nmr.mgh.harvard.edu" <Freesurfer(a)nmr.mgh.harvard.edu> > *Betreff:* Re: Fw: Aw: Re: [Freesurfer] Problem with uploading Cluster > Simulation data > > what is your command line? Or otherwise, how are you visualizing it? > > > > On 07/14/2014 08:09 AM, carina(a)van-vlodrop.de wrote: > > *Gesendet:* Sonntag, 06. Juli 2014 um 22:48 Uhr > > *Von:* "carina(a)van-vlodrop.de" <carina(a)van-vlodrop.de> > > *An:* "Freesurfer support list" <freesurfer(a)nmr.mgh.harvard.edu> > > *Betreff:* Aw: Re: [Freesurfer] Fw: Problem with uploading Cluster > > Simulation data > > Hi Doug, > > I have already uploaded a text file of my corrected results from the > > Monte Carlo Cluster Simulation which reports 15 Clusters (attached > > picture). > > There is another file ending with .mgh and the tutorial identifies it > > to be the overlay (clusterwise corrected map) which I can upload in > > freeview. > > In freeview there are the alternatives of uploading a surface or a > > volume. If I upload the file ending with .mgh as a volume I just > > recieve a black image with a few numbers on the coordinate plane > > (attached picture). There is no brain visible. > > Is it correct to upload the overlay (file ending with .mgh) as a > > volume or how should I proceed? Do I have to upload a template first > > and which is the right template? > > Thank you so much. > > Yours sincerely, > > Carina > > *Gesendet:* Montag, 16. Juni 2014 um 12:45 Uhr > > *Von:* "Douglas Greve" <greve(a)nmr.mgh.harvard.edu> > > *An:* "carina(a)van-vlodrop.de" <carina(a)van-vlodrop.de>, "free surfer" > > <freesurfer(a)nmr.mgh.harvard.edu> > > *Betreff:* Re: [Freesurfer] Fw: Problem with uploading Cluster > > Simulation data > > > > You should be able to view the map results in freeview just as you > > would any other map. > > doug > > > > > > > > > > > > On 6/12/14 12:19 PM, carina(a)van-vlodrop.de wrote: > > > > *Gesendet:* Dienstag, 10. Juni 2014 um 11:18 Uhr > > *Von:* "carina(a)van-vlodrop.de" <carina(a)van-vlodrop.de> > > *An:* freesurfer(a)nmr.mgh.harvard.edu > > *Betreff:* Problem with uploading Cluster Simulation data > > Dear freesurfer experts, > > we are conducting cortical-thickness analysis using > > freesurfer-4.4.0 and the final analysis with qdec. I have a > > question concerning the Clusterwise Correction for Multiple > > Comparison. > > Is it correct that I have to visualize the results of the Monte > > Carlo Simulation in freeview? > > Do I have to upload a special model in freeview before uploading > > the Cluster Simulation data? > > Yours sincerely, > > Carina > > > > > > _______________________________________________ Freesurfer mailing > > list Freesurfer(a)nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The > > information in this e-mail is intended only for the person to whom it > > is addressed. If you believe this e-mail was sent to you in error and > > the e-mail contains patient information, please contact the Partners > > Compliance HelpLine at http://www.partners.org/complianceline . If the > > e-mail was sent to you in error but does not contain patient > > information, please contact the sender and properly dispose of the > e-mail. > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > greve(a)nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ -- Douglas N. Greve, Ph.D. MGH-NMR Center greve(a)nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

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Temporal lobe reconstruction problem
by james pardon 15 Jul '14

15 Jul '14

Hi all, On a few subjects with a specific pathology (MS) I cannot easily reconstruct temporal lobes. I think this issue comes up quite regularly on the mailing list, and I have tried to trouble shoot using control points, WM edits, even getting back to orig/001.mgz to correct areas that may seem the culprit for breaking surface reconstruction. Some subjects have gone through 7-8 runs of recon-all with different edits but still the problem persists in a few subjects in my study. I have also tried to use -mprage and -3T flags along the way to allow more liberal control point growing, despite an improvement in my results some of subjects still have very bad surface constructions. I have attached two snapshots to this email and I am happy to upload the complete subject folder if you need to take a look at them. As far as the SNR is concerned, I have designed my study based on recommended Freesurfer parameters a couple of years ago on 3T Siemens Trio with 32-channel receiver coil. A huge thank you for your previous helps, and thanks in advance for helping me with this new issue. James

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Updated process v. files excel sheet?
by Makaretz, Sara Johanna 15 Jul '14

15 Jul '14

Hi all, I like the excel presentation of the recon-all process/files table for Freesurfer 3.0.5 found here: https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllFilesVsSteps Is there an updated document for a more recent version? (I am using 5.3.0) Also, are 5.2 and 5.3 similar enough to reference the 5.2 stable table for file order/rerunning steps? (https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllTableStableV5.2) Thank you! Sara

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Making Substancia Nigra label
by Shantanu Ghosh 15 Jul '14

15 Jul '14

Dear Freesurfer experts, I have a set of T2w Dicoms from Parkinson's patients and Control subjects. I want to extract and visualize the Substancia Nigra regions of each of these brains. Can you please suggest a way to do this (command line instructions would be great)? Thanks in advance. Shantanu -- Shantanu Ghosh, Ph.D. Harvard Medical School & Massachusetts General Hospital Martinos Center for Biomedical Imaging -- Not only is the universe stranger than we think, it is stranger than we can think. -Werner Heisenberg

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Cerebellar Vermis
by Sarosh, Cyrus 15 Jul '14

15 Jul '14

We are interested in using the Cerebellar vermis for an analysis with our PET data. Is the cerebellar vermis segmented during the FreeSurfer pipeline analysis? If it is, which file is it located in or how can I export a nifti file containing this segmentation? Thanks, Cyrus Sarosh [Description: Description: Description: Description: Description: Description: Description: cid:image002.png@01CC3BB7.F8D9A990] Research Technician Senior Department of Radiology Functional Neuroimaging, Cognitive and Mobility Laboratory ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues

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(no subject)
by Hugh Pemberton 15 Jul '14

15 Jul '14

Hi everyone, I'm getting the follow error and it's jus started happening after updating Xquartz.. any ideas what I can do? Also, i dont have a .debug_tkmedit file, when tkmedit was running normally the first line would say could not create debug file. Many thanks, Hugh ERROR: A segfault has occurred. This is not your fault, : but is most likely an unrecoverable error and has : made the program unstable. : : Please send the contents of the file .xdebug_tkmedit : that should be in this directory to freesurfer(a)nmr.mgh.harvard.edu : : Now exiting...

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Re: [Freesurfer] localGI problems
by Marie Schaer 15 Jul '14

15 Jul '14

Hi Elisa, Thanks for the update, does that mean that just adding -f to all rm in load_mgh.m worked for you? Sounds great, thanks for keeping us posted! Indeed, it's not that nobody computed the lGI, lots of people used it in published studies and from what I see in the mailing list, and I definitely used it on tons of different computer configurations, and only in one case I got this error message. It was on a lab unix server shared between many people where the rm command was aliased to copy files to the recycle bin. Not having access to this rm parameters, even using the rm -f didn't solve the problem. So, it's definitely not an lGI issue, but a rm issue… Hope everything else will go well with your processing, Marie On Jul 3, 2014, at 2:59 AM, elisa veronese <dovreipensarci(a)gmail.com<mailto:dovreipensarci@gmail.com>> wrote: YEAH! Now it is working, the '-f' option is doing something! Actually it is still in progress, I do not know if it's going to work properly until the end. But at least something is happening :) Thank you, Marie! (Did you add the '-f' to all the rm in load_mgh.m?) Best, Elisa 2014-07-03 11:46 GMT+02:00 elisa veronese <dovreipensarci(a)gmail.com<mailto:dovreipensarci@gmail.com>>: Dear Marie, thank fot your email. I'm quite confused, it seems like nobody has ever computed this localGI :( Yes, before writing to the FS mailing list i checked in the internet if anybody had had my problem and I found your posts. I will try adding the -f to force the removal, it could be an idea. I'll let you know. Ehm... what do you mean by "to process the LGI on another computer"? Do you think it is a problem linked to the OS? Best, Elisa 2014-07-02 19:17 GMT+02:00 Marie Schaer <Marie.Schaer(a)unige.ch<mailto:Marie.Schaer@unige.ch>>: Hello Elisa, I've seen this issue that the process gets stuck even if you answer the question. That happened to me and others before, see the following posts: http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg07251.html http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg32912.html But I'm afraid that we didn't find the full solution to this yet. We tried replacing all the "rm" by "rm -f" in load_mgh.m, but it didnt help. Can you try that? Maybe you're more lucky than me. So finally, on my side, the only solution I found was to process the LGI on another computer… but it's definitely not ideal! Otherwise, maybe someone else has solved this issue without posting the reply on the mailing list. If yes, I'd be very grateful to know the answer, thanks in advance! Best, Marie On Jul 2, 2014, at 12:13 AM, elisa veronese <dovreipensarci(a)gmail.com<mailto:dovreipensarci@gmail.com>> wrote: Thank you Doug, anyway I'm afraid I still have problems with the recon-all -localGI. After answering yes to the removal of the temporary file, it seems that the program stops without doing anything. Now my tmp folder contains just one file (edit.dat). Below you can see what I see from my terminal. The terminal has been stuck there since yesterday. Thank you. Best elisa [root@gc02lx fselisa]# recon-all -s 1379341346/ -sd /root/Desktop/fselisa/ -localGI INFO: FreeSurfer build stamps do not match Subject Stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0 Current Stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 INFO: SUBJECTS_DIR is /root/Desktop/fselisa Actual FREESURFER_HOME /usr/local/freesurfer -rw-r--r--. 1 root root 1658172 Jul 1 17:30 /root/Desktop/fselisa/1379341346/scripts/recon-all.log Linux gc02lx 2.6.32-358.2.1.el6.x86_64 #1 SMP Tue Mar 12 14:18:09 CDT 2013 x86_64 x86_64 x86_64 GNU/Linux INFO: current FREESURFER_HOME does not match that of previous processing. Current: /usr/local/freesurfer Previous: /home/tmp/6004023.clrlcgce03.in2p3.fr/CREAM251988513/DIRAC_lhrUhWpilot/6418014/recon-all.sh-3038867747447129/freesurfer<http://6004023.clrlcgce03.in2p3.fr/CREAM251988513/DIRAC_lhrUhWpilot/6418014…> /root/Desktop/fselisa/1379341346/surf #-------------------------------------------- #@# Local Gyrification Index lh Tue Jul 1 17:31:13 CEST 2014 mris_compute_lgi --i lh.pial ================= rm -Rf /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial ================= ================= mkdir -p /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial ================= ================= mris_fill -c -r 1 lh.pial /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz ================= reading surface from lh.pial... writing filled volume to /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz... conforming output volume setting resolution for intermediate calculations to 1.0000 ================= make_outer_surface('/root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz',15,'/root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer'); exit ================= Warning: Unable to open display 'iconic'. You will not be able to display graphics on the screen. < M A T L A B (R) > Copyright 1984-2012 The MathWorks, Inc. R2012b (8.0.0.783) 64-bit (glnxa64) August 22, 2012 To get started, type one of these: helpwin, helpdesk, or demo. For product information, visit www.mathworks.com<http://www.mathworks.com/>. >> reading filled volume... rm: remove regular file `/tmp/tp1773697773286350.load_mgh.2127429.mgh'? y 2014-06-27 20:25 GMT+02:00 Douglas N Greve <greve(a)nmr.mgh.harvard.edu<mailto:greve@nmr.mgh.harvard.edu>>: #1. not a problem #2. yes, delete it doug On 06/27/2014 03:41 AM, elisa veronese wrote: > Dear FS users, > > I'm trying the -localGI on a linux Centos machine, but I'm facing some > problems: > 1. should I worry about the /Warning: Unable to open display > 'iconic'. You will not be able to display graphics on the screen. /?/ > / > 2. the script asks me if I wan to remove a file (rm: remove regular > file `/tmp/tp726715349117711.load_mgh.8128471.mgh'?). Should I say > yes and remove it? Is it important? Should I keep it? I tried > answering /no/, but now everything seems to be stuck without > performing any subsequent processing. > > Below there is the output I got. > > Thank you. > Regards, > elisa > > > [root@gc02lx fselisa]# recon-all -s 1379341346/ -sd > /root/Desktop/fselisa/ -localGI > INFO: FreeSurfer build stamps do not match > Subject Stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0 > Current Stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 > INFO: SUBJECTS_DIR is /root/Desktop/fselisa > Actual FREESURFER_HOME /usr/local/freesurfer > -rw-r--r--. 1 root root 1624545 Jun 26 18:08 > /root/Desktop/fselisa/1379341346/scripts/recon-all.log > Linux gc02lx 2.6.32-358.2.1.el6.x86_64 #1 SMP Tue Mar 12 14:18:09 CDT > 2013 x86_64 x86_64 x86_64 GNU/Linux > INFO: current FREESURFER_HOME does not match that of previous processing. > Current: /usr/local/freesurfer > Previous: > /home/tmp/6004023.clrlcgce03.in2p3.fr/CREAM251988513/DIRAC_lhrUhWpilot/6418014/recon-all.sh-3038867747447129/freesurfer<http://6004023.clrlcgce03.in2p3.fr/CREAM251988513/DIRAC_lhrUhWpilot/6418014…> > <http://6004023.clrlcgce03.in2p3.fr/CREAM251988513/DIRAC_lhrUhWpilot/6418014…> > /root/Desktop/fselisa/1379341346/surf > #-------------------------------------------- > #@# Local Gyrification Index lh Fri Jun 27 09:23:34 CEST 2014 > > mris_compute_lgi --i lh.pial > > ================= > rm -Rf /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial > ================= > ================= > mkdir -p > /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial > ================= > ================= > mris_fill -c -r 1 lh.pial > /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz > ================= > reading surface from lh.pial... > writing filled volume to > /root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz... > conforming output volume > setting resolution for intermediate calculations to 1.0000 > ================= > make_outer_surface('/root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz',15,'/root/Desktop/fselisa/1379341346/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer'); > exit > ================= > Warning: Unable to open display 'iconic'. You will not be able to > display graphics on the screen. > > < M A T L A B (R) > > Copyright 1984-2012 The MathWorks, Inc. > R2012b (8.0.0.783) 64-bit (glnxa64) > August 22, 2012 > > > To get started, type one of these: helpwin, helpdesk, or demo. > For product information, visit www.mathworks.com<http://www.mathworks.com/> > <http://www.mathworks.com<http://www.mathworks.com/>>. > > >> reading filled volume... > rm: remove regular file `/tmp/tp726715349117711.load_mgh.8128471.mgh'? > > > > -- > Elisa Veronese - PhD > > / > Research Unit on Brain Imaging and Neuropsychology (RUBIN) > / > / > Inter-University Center for Behavioral Neurosciences (ICBN) > University of Udine and University of Verona, Italy > / > ICBN Website: http://icbn.uniud.it/tiki-index.php > / > > / > > > _______________________________________________ > Freesurfer mailing list > Freesurfer(a)nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center greve(a)nmr.mgh.harvard.edu<mailto:greve@nmr.mgh.harvard.edu> Phone Number: 617-724-2358<tel:617-724-2358> Fax: 617-726-7422<tel:617-726-7422> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer(a)nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Elisa Veronese - PhD Research Unit on Brain Imaging and Neuropsychology (RUBIN) Inter-University Center for Behavioral Neurosciences (ICBN) University of Udine and University of Verona, Italy ICBN Website: http://icbn.uniud.it/tiki-index.php _______________________________________________ Freesurfer mailing list Freesurfer(a)nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer(a)nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Elisa Veronese - PhD Research Unit on Brain Imaging and Neuropsychology (RUBIN) Inter-University Center for Behavioral Neurosciences (ICBN) University of Udine and University of Verona, Italy ICBN Website: http://icbn.uniud.it/tiki-index.php -- Elisa Veronese - PhD Research Unit on Brain Imaging and Neuropsychology (RUBIN) Inter-University Center for Behavioral Neurosciences (ICBN) University of Udine and University of Verona, Italy ICBN Website: http://icbn.uniud.it/tiki-index.php

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Error in pre-processing in TRACULA
by 渡辺杏里 14 Jul '14

14 Jul '14

Dear TRACULA experts I am writing to ask about an error in pre-processing in TRACULA. After making FSL radiological header of dwi_orig_flip.nii.gz, an error occurs. When the name of file is changed from dwi_orig_flip.mghdti.bvals to bvals, I can't find the file dwi_orig_flip.mghdti.bvecs. So an error is mv: rename /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/dwi_orig_flip.mghdti.bvals to /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/bvals: No such file or directory caused. The content of bvals is not overwritten. I attached my configuration file, the error log and bvals. Many thanks for your help. Best Wishes, Anri WATANABE -error log- fslorient -forceradiological /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/dwi_orig_flip.nii.gz INFO: found /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/dwi_orig.mghdti.bvecs, converting to FSL format mv -f /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/dwi_orig_flip.mghdti.bvecs /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/bvecs mv -f /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/dwi_orig_flip.mghdti.bvals /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/bvals mv: rename /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/dwi_orig_flip.mghdti.bvals to /volumes/mybook/Anri/diffusion_tutorial/HC_025/dmri/bvals: No such file or directory ********************************************************************** 京都府立医科大学附属病院精神科・心療内科渡辺杏里 ********************************************************************** WATANABE ANRI Department of Psychiatry, University Hospital, Kyoto Prefectural University of Medicine **********************************************************************

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