i ran trac-all -prep -c dmrirc_single_subject and got the error :
fslmaths /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/anat_brain_mask.nii.gz -mul /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/notventricles.nii.gz /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/anat_brain_mask-vent.nii.gz Image Exception : #3 :: Attempted to multiply images/ROIs of different sizes terminate called after throwing an instance of 'RBD_COMMON::BaseException' Abort
I have attached the trac-all .log and trac-all.error files
I don't know how to fix this error
Thanks Jon
attached is the dmrirc config file
----- Original Message ----- From: "Jon Wieser" wieser@uwm.edu To: "freesurfer" freesurfer@nmr.mgh.harvard.edu Sent: Wednesday, March 27, 2013 3:33:03 PM Subject: [Freesurfer] error during trac-all -prep
i ran trac-all -prep -c dmrirc_single_subject and got the error :
fslmaths /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/anat_brain_mask.nii.gz -mul /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/notventricles.nii.gz /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/anat_brain_mask-vent.nii.gz Image Exception : #3 :: Attempted to multiply images/ROIs of different sizes terminate called after throwing an instance of 'RBD_COMMON::BaseException' Abort
I have attached the trac-all .log and trac-all.error files
I don't know how to fix this error
Thanks Jon
Hi Jon - The command that fails is trying to multiply 2 volumes and complains that they have different sizes. Have you checked if these 2 volumes exist and what their dimensions are?
a.y
On Wed, 27 Mar 2013, Jon Wieser wrote:
i ran trac-all -prep -c dmrirc_single_subject and got the error :
fslmaths /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/anat_brain_mask.nii.gz -mul /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/notventricles.nii.gz /BrainLabDocs/Studies/Alcohol_Study/Alc_Data_Faces/1223/freesurfer/dlabel/anatorig/anat_brain_mask-vent.nii.gz Image Exception : #3 :: Attempted to multiply images/ROIs of different sizes terminate called after throwing an instance of 'RBD_COMMON::BaseException' Abort
I have attached the trac-all .log and trac-all.error files
I don't know how to fix this error
Thanks Jon
freesurfer@nmr.mgh.harvard.edu