Hi All,
I'm trying to extract time courses from functional data
I started by registering my motion corrected functional data to my segmentation using bbregister, then I used:
mri_vol2surf --src Motioncorrectedfunctional.nii.gz --srcreg register.dat --out suface.mgz —hemi rh &
mri_segstats --in surface.mgz --annot subject rh aparc --sum sum_output --avgwf Timecourse_output
Is this a sensible thing to do? I'm not particually sure about the mri_vol2surf step..
Thanks in advance.
Pete
yes, that is the correct procedure. doug
Hellyer, Peter wrote:
Hi All,
I'm trying to extract time courses from functional data
I started by registering my motion corrected functional data to my segmentation using bbregister, then I used:
mri_vol2surf --src Motioncorrectedfunctional.nii.gz --srcreg register.dat --out suface.mgz —hemi rh &
mri_segstats --in surface.mgz --annot subject rh aparc --sum sum_output --avgwf Timecourse_output
Is this a sensible thing to do? I'm not particually sure about the mri_vol2surf step..
Thanks in advance.
Pete
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