Hello Freesurfers,
I got this error on my processing and wondered what the problem may be:
Talairach Failure Detection Mon Aug 15 16:26:35 SAST 2011 /mnt/hgfs/VBM/freesurfer_EONCS/EONCS/NN117/mri
talairach_afd -T 0.005 -xfm transforms/talairach.xfm
ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050) Linux localhost.localdomain 2.6.18-8.1.8.el5 #1 SMP Tue Jul 10 06:50:22 EDT 2007 i686 i686 i386 GNU/Linux
recon-all exited with ERRORS at Mon Aug 15 16:26:35 SAST 2011
Any help would be greatly appreciated!
Kind regards, Fatima
can you visually inspect the talairach xform in tkmedit and see if it looks correct (or tkregister2)? What format were the images you gave to recon-all? If analyze, make sure that the orientation is correct
cheers Bruce
On Fri, 19 Aug 2011, Ahmed, F, Me fahmed@sun.ac.za wrote:
Hello Freesurfers, I got this error on my processing and wondered what the problem may be: Talairach Failure Detection Mon Aug 15 16:26:35 SAST 2011 /mnt/hgfs/VBM/freesurfer_EONCS/EONCS/NN117/mri talairach_afd -T 0.005 -xfm transforms/talairach.xfm ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050) Linux localhost.localdomain 2.6.18-8.1.8.el5 #1 SMP Tue Jul 10 06:50:22 EDT 2007 i686 i686 i386 GNU/Linux recon-all exited with ERRORS at Mon Aug 15 16:26:35 SAST 2011 Any help would be greatly appreciated! Kind regards, Fatima
freesurfer@nmr.mgh.harvard.edu