Hello Freesurfer Team!
I’ve been having an issue using the tkmedit function in freesurfer. I get the following error:
ERROR: FreeSurfer license file /Users/smig9x/Applications/freesurfer//.license not found.
If you are outside the NMR-Martinos Center,
go to http://surfer.nmr.mgh.harvard.edu to
get a valid license file (it's free).
If you are inside the NMR-Martinos Center,
make sure to source the standard environment.
However, I do in fact have both a license.txt and LICENSE file in my freesurfer home directory. Why am I still receiving this error message? Thanks in advance for the help!
Best,
Michael S.
Hello Micheal,
Can you please provide me the output when you 'cd' into the FREESURFER_HOME directory and type the command 'ls -a'
-Zeke
On 10/01/2014 08:56 AM, Smith, Michael wrote:
Hello Freesurfer Team!
I’ve been having an issue using the tkmedit function in freesurfer. I get the following error:
ERROR: FreeSurfer license file /Users/smig9x/Applications/freesurfer//.license not found.
If you are outside the NMR-Martinos Center,
go to http://surfer.nmr.mgh.harvard.edu to
get a valid license file (it's free).
If you are inside the NMR-Martinos Center,
make sure to source the standard environment.
However, I do in fact have both a license.txt and LICENSE file in my freesurfer home directory. Why am I still receiving this error message? Thanks in advance for the help!
Best,
Michael S.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Zeke,
Attached is a screenshot. Thanks!
On 10/1/14, 11:03 AM, "Z K" zkaufman@nmr.mgh.harvard.edu wrote:
Hello Micheal,
Can you please provide me the output when you 'cd' into the FREESURFER_HOME directory and type the command 'ls -a'
-Zeke
On 10/01/2014 08:56 AM, Smith, Michael wrote:
Hello Freesurfer Team!
I¹ve been having an issue using the tkmedit function in freesurfer. I get the following error:
ERROR: FreeSurfer license file /Users/smig9x/Applications/freesurfer//.license not found.
If you are outside the NMR-Martinos Center,
go to http://surfer.nmr.mgh.harvard.edu to
get a valid license file (it's free).
If you are inside the NMR-Martinos Center,
make sure to source the standard environment.
However, I do in fact have both a license.txt and LICENSE file in my freesurfer home directory. Why am I still receiving this error message? Thanks in advance for the help!
Best,
Michael S.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Hmmm... The error say:
ERROR: FreeSurfer license file /Users/smig9x/Applications/freesurfer//.license not found.
And according to your screen capture I also do not see that file. But I do see license.txt which should work.
Can you try just renaming (or copying) the file "license.txt" to ".license" and see what happens? This can be done with the following command:
cd /Applications/freesurfer cp license.txt .license
Give that a shot and try again.
-Zeke
On 10/01/2014 12:35 PM, Smith, Michael wrote:
Zeke,
Attached is a screenshot. Thanks!
On 10/1/14, 11:03 AM, "Z K" zkaufman@nmr.mgh.harvard.edu wrote:
Hello Micheal,
Can you please provide me the output when you 'cd' into the FREESURFER_HOME directory and type the command 'ls -a'
-Zeke
On 10/01/2014 08:56 AM, Smith, Michael wrote:
Hello Freesurfer Team!
I¹ve been having an issue using the tkmedit function in freesurfer. I get the following error:
ERROR: FreeSurfer license file /Users/smig9x/Applications/freesurfer//.license not found.
If you are outside the NMR-Martinos Center, go to http://surfer.nmr.mgh.harvard.edu to get a valid license file (it's free). If you are inside the NMR-Martinos Center, make sure to source the standard environment.However, I do in fact have both a license.txt and LICENSE file in my freesurfer home directory. Why am I still receiving this error message? Thanks in advance for the help!
Best,
Michael S.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Zeke,
That fixed it! Thank you.
On 10/1/14, 1:05 PM, "Z K" zkaufman@nmr.mgh.harvard.edu wrote:
Hmmm... The error say:
ERROR: FreeSurfer license file /Users/smig9x/Applications/freesurfer//.license not found.
And according to your screen capture I also do not see that file. But I do see license.txt which should work.
Can you try just renaming (or copying) the file "license.txt" to ".license" and see what happens? This can be done with the following command:
cd /Applications/freesurfer cp license.txt .license
Give that a shot and try again.
-Zeke
On 10/01/2014 12:35 PM, Smith, Michael wrote:
Zeke,
Attached is a screenshot. Thanks!
On 10/1/14, 11:03 AM, "Z K" zkaufman@nmr.mgh.harvard.edu wrote:
Hello Micheal,
Can you please provide me the output when you 'cd' into the FREESURFER_HOME directory and type the command 'ls -a'
-Zeke
On 10/01/2014 08:56 AM, Smith, Michael wrote:
Hello Freesurfer Team!
I¹ve been having an issue using the tkmedit function in freesurfer. I get the following error:
ERROR: FreeSurfer license file /Users/smig9x/Applications/freesurfer//.license not found.
If you are outside the NMR-Martinos Center, go to http://surfer.nmr.mgh.harvard.edu to get a valid license file (it's free). If you are inside the NMR-Martinos Center, make sure to source the standard environment.However, I do in fact have both a license.txt and LICENSE file in my freesurfer home directory. Why am I still receiving this error message? Thanks in advance for the help!
Best,
Michael S.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Smith, Michael -
Z K