Hello,
I am having some trouble with freesurfer causing a system to hang. After processing a subject for several hours the system becomes unresponsive and a hard reboot is required. The system doesn't do this except when freesurfer is running.
Here is some info on the system:
Linux 2.4.21-15.0.4.ELsmp
There are 4 processors: processor : 0 vendor_id : GenuineIntel cpu family : 15 model : 2 model name : Intel(R) Xeon(TM) CPU 2.80GHz stepping : 7 cpu MHz : 2799.707 cache size : 512 KB
And lots of memory: total used free shared buffers cached Mem: 3022 1826 1195 0 70 1399 -/+ buffers/cache: 356 2665 Swap: 517 0 517
Thanks for any help or ideas,
Joe
____________________________________________________________________________ Joe Berens Department of Electrical and Computer Engineering University of Minnesota - Twin Cities Phone: 612-625-4585 200 Union Street SE, Room 4-174 Email: joe@ece.umn.edu Minneapolis, MN 55455 Office: EE/CSsci 1-183 ____________________________________________________________________________ ____________________________________________________________________________ Joe Berens Department of Psychology University of Minnesota - Twin Cities Phone: 612-624-3601 75 East River Road Email: joe@umn.edu Minneapolis, MN 55455 Office: 160e Elliot Hall ____________________________________________________________________________
Hi Joe,
we need more information than this. Do you have screen output? What process was running? Check the subject to make sure nothing is wrong with it (e.g. cerebellum attached)
That said, I don't think I've ever seen a freesurfer-induced hard reboot. Sounds more like something is wrong with your machine (that's always a developers first guess :>).
cheers, Bruce
On Wed, 11 May 2005, Joe Berens wrote:
Hello,
I am having some trouble with freesurfer causing a system to hang. After processing a subject for several hours the system becomes unresponsive and a hard reboot is required. The system doesn't do this except when freesurfer is running.
Here is some info on the system:
Linux 2.4.21-15.0.4.ELsmp
There are 4 processors: processor : 0 vendor_id : GenuineIntel cpu family : 15 model : 2 model name : Intel(R) Xeon(TM) CPU 2.80GHz stepping : 7 cpu MHz : 2799.707 cache size : 512 KB
And lots of memory: total used free shared buffers cached Mem: 3022 1826 1195 0 70 1399 -/+ buffers/cache: 356 2665 Swap: 517 0 517
Thanks for any help or ideas,
Joe
Joe Berens Department of Electrical and Computer Engineering University of Minnesota - Twin Cities Phone: 612-625-4585 200 Union Street SE, Room 4-174 Email: joe@ece.umn.edu Minneapolis, MN 55455 Office: EE/CSsci 1-183 ____________________________________________________________________________ ____________________________________________________________________________ Joe Berens Department of Psychology University of Minnesota - Twin Cities Phone: 612-624-3601 75 East River Road Email: joe@umn.edu Minneapolis, MN 55455 Office: 160e Elliot Hall ____________________________________________________________________________
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Bruce,
we need more information than this. Do you have screen output? What process was running? Check the subject to make sure nothing is wrong with it (e.g. cerebellum attached)
There is no screen output, the screen goes blank. I am not running freesurfer myself, I am just the admin for this system, I will try to find out if there is something wrong with the subject.
That said, I don't think I've ever seen a freesurfer-induced hard reboot. Sounds more like something is wrong with your machine (that's always a developers first guess :>).
This was my first thought also, however the system works fine in any other context.
Thanks,
Joe
cheers, Bruce
On Wed, 11 May 2005, Joe Berens wrote:
Hello,
I am having some trouble with freesurfer causing a system to hang. After processing a subject for several hours the system becomes unresponsive and a hard reboot is required. The system doesn't do this except when freesurfer is running.
Here is some info on the system:
Linux 2.4.21-15.0.4.ELsmp
There are 4 processors: processor : 0 vendor_id : GenuineIntel cpu family : 15 model : 2 model name : Intel(R) Xeon(TM) CPU 2.80GHz stepping : 7 cpu MHz : 2799.707 cache size : 512 KB
And lots of memory: total used free shared buffers cached Mem: 3022 1826 1195 0 70 1399 -/+ buffers/cache: 356 2665 Swap: 517 0 517
Thanks for any help or ideas,
Joe
Joe Berens Department of Electrical and Computer Engineering University of Minnesota - Twin Cities Phone: 612-625-4585 200 Union Street SE, Room 4-174 Email: joe@ece.umn.edu Minneapolis, MN 55455 Office: EE/CSsci 1-183 ____________________________________________________________________________ ____________________________________________________________________________ Joe Berens Department of Psychology University of Minnesota - Twin Cities Phone: 612-624-3601 75 East River Road Email: joe@umn.edu Minneapolis, MN 55455 Office: 160e Elliot Hall ____________________________________________________________________________
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
____________________________________________________________________________ Joe Berens Department of Electrical and Computer Engineering University of Minnesota - Twin Cities Phone: 612-625-4585 200 Union Street SE, Room 4-174 Email: joe@ece.umn.edu Minneapolis, MN 55455 Office: EE/CSsci 1-183 ____________________________________________________________________________ ____________________________________________________________________________ Joe Berens Department of Psychology University of Minnesota - Twin Cities Phone: 612-624-3601 75 East River Road Email: joe@umn.edu Minneapolis, MN 55455 Office: 160e Elliot Hall ____________________________________________________________________________
freesurfer@nmr.mgh.harvard.edu