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Dear all,
depends the Segmentation of hippocampal subfields and nuclei of the amygdala pipeline on the fs-recon all pipeline? I made some changes mainly by defining control points to fix intensity normalization in my dataset and rerun recon all. I´m not sure if I also have to rerun the subfields pipeline now?
Thanks, Boris
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Yes! The changes will probably be tiny, though. Cheers, /Eugenio
-- Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Boris Rauchmann boris.rauchmann@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Wednesday, 5 June 2019 at 15:12 To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Segmentation of hippocampal subfields and nuclei of the amygdala
External Email - Use Caution Dear all,
depends the Segmentation of hippocampal subfields and nuclei of the amygdala pipeline on the fs-recon all pipeline? I made some changes mainly by defining control points to fix intensity normalization in my dataset and rerun recon all. I´m not sure if I also have to rerun the subfields pipeline now?
Thanks, Boris
freesurfer@nmr.mgh.harvard.edu
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Boris Rauchmann -
Iglesias Gonzalez, Eugenio