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Hi,
Is there a way to get at the white matter volume from a group analysis?
Sara
Not sure what you mean
On 2/1/2021 12:32 PM, Sara Lyn wrote:
External Email - Use Caution
Hi,
Is there a way to get at the white matter volume from a group analysis?
Sara
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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Hi Dr Greve,
Instead of using DTI to get at the FA/MD etc measures is there a way to get at the volume of the white matter?
Best, Sara
On Tue, Feb 2, 2021 at 10:54 AM Douglas N. Greve dgreve@mgh.harvard.edu wrote:
Not sure what you mean
On 2/1/2021 12:32 PM, Sara Lyn wrote:
External Email - Use CautionHi,
Is there a way to get at the white matter volume from a group analysis?
Sara
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1nxIWaZHNI7xNtv85vkNHiK2rzIYpWyRgsNK2sYLfcAoTWy...
sorry, still don't understand. do you want to get the volume of WM from DTI?
On 2/2/2021 11:19 AM, Sara Lyn wrote:
External Email - Use Caution
Hi Dr Greve,
Instead of using DTI to get at the FA/MD etc measures is there a way to get at the volume of the white matter?
Best, Sara
On Tue, Feb 2, 2021 at 10:54 AM Douglas N. Greve <dgreve@mgh.harvard.edu mailto:dgreve@mgh.harvard.edu> wrote:
Not sure what you mean On 2/1/2021 12:32 PM, Sara Lyn wrote:External Email - Use Caution Hi, Is there a way to get at the white matter volume from a group analysis? Sara _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1nxIWaZHNI7xNtv85vkNHiK2rzIYpWyRgsNK2sYLfcAoTWyH4nSJEVLRGcnHxr97Vi8Icr7uk_oFxUBPO0I8nlD9KwcNgX2mqq6yOIpJTVpx76geIQXuhPKliIL2KOV4b00z3LD_75LfkmM2ZREsai9hWUYqz1iSv77kQETpj-4XkQRPDdIIfi2W2jkOdvssNCWywGAF6e111YdqjKm0HtYMVI4CYBjFFvE8Tk_60tVQehASKha2zqOWVuQlCD2mdfUxbiuyc6UfRMC7wuRWH_Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1nxIWaZHNI7xNtv85vkNHiK2rzIYpWyRgsNK2sYLfcAoTWyH4nSJEVLRGcnHxr97Vi8Icr7uk_oFxUBPO0I8nlD9KwcNgX2mqq6yOIpJTVpx76geIQXuhPKliIL2KOV4b00z3LD_75LfkmM2ZREsai9hWUYqz1iSv77kQETpj-4XkQRPDdIIfi2W2jkOdvssNCWywGAF6e111YdqjKm0HtYMVI4CYBjFFvE8Tk_60tVQehASKha2zqOWVuQlCD2mdfUxbiuyc6UfRMC7wuRWH_Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>
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If that's the correct way to do it then yes since I don't know about this. If not, is the volume of white matter obtained from freesurfers glmfit group analyses?
On Tue, Feb 2, 2021 at 11:39 AM Douglas N. Greve dgreve@mgh.harvard.edu wrote:
sorry, still don't understand. do you want to get the volume of WM from DTI?
On 2/2/2021 11:19 AM, Sara Lyn wrote:
External Email - Use CautionHi Dr Greve,
Instead of using DTI to get at the FA/MD etc measures is there a way to get at the volume of the white matter?
Best, Sara
On Tue, Feb 2, 2021 at 10:54 AM Douglas N. Greve dgreve@mgh.harvard.edu wrote:
Not sure what you mean
On 2/1/2021 12:32 PM, Sara Lyn wrote:
External Email - Use CautionHi,
Is there a way to get at the white matter volume from a group analysis?
Sara
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.edu*MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1mFhEizu4Fx-vZ0Cn8uHzkNGSCaMMFACs4pDOVxupD9yud9... https://secure-web.cisco.com/1nxIWaZHNI7xNtv85vkNHiK2rzIYpWyRgsNK2sYLfcAoTWyH4nSJEVLRGcnHxr97Vi8Icr7uk_oFxUBPO0I8nlD9KwcNgX2mqq6yOIpJTVpx76geIQXuhPKliIL2KOV4b00z3LD_75LfkmM2ZREsai9hWUYqz1iSv77kQETpj-4XkQRPDdIIfi2W2jkOdvssNCWywGAF6e111YdqjKm0HtYMVI4CYBjFFvE8Tk_60tVQehASKha2zqOWVuQlCD2mdfUxbiuyc6UfRMC7wuRWH_Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
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Not from a group analysis, but you can get it from running asegstats2table. See our tutorial on ROIs https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI
On 2/2/2021 11:44 AM, Sara Lyn wrote:
External Email - Use Caution
If that's the correct way to do it then yes since I don't know about this. If not, is the volume of white matter obtained from freesurfers glmfit group analyses?
On Tue, Feb 2, 2021 at 11:39 AM Douglas N. Greve <dgreve@mgh.harvard.edu mailto:dgreve@mgh.harvard.edu> wrote:
sorry, still don't understand. do you want to get the volume of WM from DTI? On 2/2/2021 11:19 AM, Sara Lyn wrote:External Email - Use Caution Hi Dr Greve, Instead of using DTI to get at the FA/MD etc measures is there a way to get at the volume of the white matter? Best, Sara On Tue, Feb 2, 2021 at 10:54 AM Douglas N. Greve <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> wrote: Not sure what you mean On 2/1/2021 12:32 PM, Sara Lyn wrote:External Email - Use Caution Hi, Is there a way to get at the white matter volume from a group analysis? Sara _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1nxIWaZHNI7xNtv85vkNHiK2rzIYpWyRgsNK2sYLfcAoTWyH4nSJEVLRGcnHxr97Vi8Icr7uk_oFxUBPO0I8nlD9KwcNgX2mqq6yOIpJTVpx76geIQXuhPKliIL2KOV4b00z3LD_75LfkmM2ZREsai9hWUYqz1iSv77kQETpj-4XkQRPDdIIfi2W2jkOdvssNCWywGAF6e111YdqjKm0HtYMVI4CYBjFFvE8Tk_60tVQehASKha2zqOWVuQlCD2mdfUxbiuyc6UfRMC7wuRWH_Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1nxIWaZHNI7xNtv85vkNHiK2rzIYpWyRgsNK2sYLfcAoTWyH4nSJEVLRGcnHxr97Vi8Icr7uk_oFxUBPO0I8nlD9KwcNgX2mqq6yOIpJTVpx76geIQXuhPKliIL2KOV4b00z3LD_75LfkmM2ZREsai9hWUYqz1iSv77kQETpj-4XkQRPDdIIfi2W2jkOdvssNCWywGAF6e111YdqjKm0HtYMVI4CYBjFFvE8Tk_60tVQehASKha2zqOWVuQlCD2mdfUxbiuyc6UfRMC7wuRWH_Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1mFhEizu4Fx-vZ0Cn8uHzkNGSCaMMFACs4pDOVxupD9yud98dsA6MG_BtyxgPpvhWKsLySWrrAOreJMoBwyQ0UZ8MCbjCUz7d7XC-2X3i2xMCWyAcLAsTIC_P6qfQ8p24t5fK15SrlcU4kwXKumjpTBCrXUKmt-mhwarJF2Am7A4duXq0JS4hJXwKXHkOqIetSBhSApQLHh2ZjRQ6z80XBD1SyiQ51Ow9HNBu4D8ekgUix8j-Ik1ahcYhhe30r4pghx7Hm6FSeg27Vi0DBQ279g/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1mFhEizu4Fx-vZ0Cn8uHzkNGSCaMMFACs4pDOVxupD9yud98dsA6MG_BtyxgPpvhWKsLySWrrAOreJMoBwyQ0UZ8MCbjCUz7d7XC-2X3i2xMCWyAcLAsTIC_P6qfQ8p24t5fK15SrlcU4kwXKumjpTBCrXUKmt-mhwarJF2Am7A4duXq0JS4hJXwKXHkOqIetSBhSApQLHh2ZjRQ6z80XBD1SyiQ51Ow9HNBu4D8ekgUix8j-Ik1ahcYhhe30r4pghx7Hm6FSeg27Vi0DBQ279g/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>
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Douglas N. Greve -
Sara Lyn