Dear Freesurfers,
I am trying to reduce the number of vertices to display with the wireframe overlay on the inflated cortical surface. To this aim, I am using the following command line:
mri_surf2surf --s Estudio_EHM_average --sval-xyz inflated --tval /root/trabajo/freesurfer/subjects/Estudio_EHM_average/surf/lh.reshaped.inflated --tval-xyz --hemi lh --reshape --reshape-factor 7
But when I load the reshaped surface in Matlab it contains the same number of vertices as originally. Why the reshape command (factor 7) is not decreasing the number of vertices on cortical surfaces?
Thanks in advance.
Best regards, Jose --- Jose L. Cantero, Ph.D. Laboratory of Functional Neuroscience Department of Physiology, Anatomy and Cell Biology University Pablo de Olavide Ctra. de Utrera, Km.1 41013 - Seville - Spain - Phone: +34 954 977433 Fax: +34 954 349151 Email: jlcanlor@upo.es http://www.upo.es/neuroaging/es/
Hi Jose, that won't do it. You need to create a surface with fewer vertices. Try setting --trgicorder to 5 or 6 (your current value is effectively 7). Run with --help to get a list of orders and their number of vertices.
doug
Jose Luis Cantero Lorente wrote:
Dear Freesurfers,
I am trying to reduce the number of vertices to display with the wireframe overlay on the inflated cortical surface. To this aim, I am using the following command line:
mri_surf2surf --s Estudio_EHM_average --sval-xyz inflated --tval /root/trabajo/freesurfer/subjects/Estudio_EHM_average/surf/lh.reshaped.inflated --tval-xyz --hemi lh --reshape --reshape-factor 7
But when I load the reshaped surface in Matlab it contains the same number of vertices as originally. Why the reshape command (factor 7) is not decreasing the number of vertices on cortical surfaces?
Thanks in advance.
Best regards, Jose
Jose L. Cantero, Ph.D. Laboratory of Functional Neuroscience Department of Physiology, Anatomy and Cell Biology University Pablo de Olavide Ctra. de Utrera, Km.1 41013 - Seville
- Spain -
Phone: +34 954 977433 Fax: +34 954 349151 Email: jlcanlor@upo.es http://www.upo.es/neuroaging/es/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu