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Hello Freesurfers, I have a question about the command asegstats2table. I want to obtain the structural data of a group set based on labels created by myself. I see that this is possible with mris_anatomicalstats for 1 subject but can I obtain the data for all my subjects in some way like asegstats2table using my labels?
Hi Alberto,
My name is Devani Cordero, I'm a research technician for the FreeSurfer lab. You can absolutely use asegstats2table. First, what kind of labels did you create? Did you make them based off of a volume such as T1.mgz or did you create them on a surface?
Let me know!
Devani
Devani C. Cordero Data Analyst | Intern Supervisor Laboratory for Computational Neuroimaging Martinos Center for Biomedical Imaging Massachusetts General Hospital 149 13th Street Charlestown, MA 02129 p: (661) 904-3534
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Alberto Del Cerro Leon bertocerron@gmail.com Sent: Friday, December 11, 2020 6:57 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] asegstats2table
External Email - Use Caution
Hello Freesurfers, I have a question about the command asegstats2table. I want to obtain the structural data of a group set based on labels created by myself. I see that this is possible with mris_anatomicalstats for 1 subject but can I obtain the data for all my subjects in some way like asegstats2table using my labels?
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I employed labels based on AAL atlas (volume ROIs) but I registered them into the surface with mri_vol2surf. So I have multiple labels on the surface
El jue, 17 dic 2020 a las 21:19, Cordero, Devani Coryn (< DCCORDERO@mgh.harvard.edu>) escribió:
Hi Alberto,
My name is Devani Cordero, I'm a research technician for the FreeSurfer lab. You can absolutely use asegstats2table. First, what kind of labels did you create? Did you make them based off of a volume such as T1.mgz or did you create them on a surface?
Let me know!
Devani
Devani C. Cordero
*Data Analyst | Intern Supervisor * Laboratory for Computational Neuroimaging Martinos Center for Biomedical Imaging Massachusetts General Hospital 149 13th Street Charlestown, MA 02129 p: (661) 904-3534
*From:* freesurfer-bounces@nmr.mgh.harvard.edu < freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Alberto Del Cerro Leon bertocerron@gmail.com *Sent:* Friday, December 11, 2020 6:57 AM *To:* Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Subject:* [Freesurfer] asegstats2table
External Email - Use CautionHello Freesurfers, I have a question about the command asegstats2table. I want to obtain the structural data of a group set based on labels created by myself. I see that this is possible with mris_anatomicalstats for 1 subject but can I obtain the data for all my subjects in some way like asegstats2table using my labels? _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/176kCBFaQu0sf2w_S-Or_EegAFPutWGhvfM7EHS5Fgr3LFQ...
If you use mris_anatomicalstats to create the stats file (in the stats folder), then use aparcstats2table to create a table from multiple subjects
On 12/11/2020 6:57 AM, Alberto Del Cerro Leon wrote:
External Email - Use Caution
Hello Freesurfers, I have a question about the command asegstats2table. I want to obtain the structural data of a group set based on labels created by myself. I see that this is possible with mris_anatomicalstats for 1 subject but can I obtain the data for all my subjects in some way like asegstats2table using my labels?
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