Dear Bruce,
Would you mind tell me if there is a function of freesurfer that I can use to do the same step of qcache to smooth and interpolate in the fsaverage one subject with mri_surf2surf I can smooth only or align one subject with an average. thank you for you help. with best regards, Fatma
Hi Fatma
you can use mri_surf2surf within subject I believe, but Doug can confirm (although he's traveling so it may be a bit). You can also do it interactively in tksurfer.
cheers Bruce
On Mon, 29 Jul 2013, fatma zribi wrote:
Dear Bruce,
Would you mind tell me if there is a function of freesurfer that I can use to do the same step of qcache to smooth and interpolate in the fsaverage one subject with mri_surf2surf I can smooth only or align one subject with an average. thank you for you help. with best regards, Fatma
Dear Bruce, I have tried mri-surf2surf, it makes the result (smoothed curv for example) with the same dimension of the subject. But I would like a smoothed file with the dimesion of fsaverage.
Thank you for your help.
With best regards,
Fatma
2013/7/29 Bruce Fischl fischl@nmr.mgh.harvard.edu
Hi Fatma
you can use mri_surf2surf within subject I believe, but Doug can confirm (although he's traveling so it may be a bit). You can also do it interactively in tksurfer.
cheers Bruce
On Mon, 29 Jul 2013, fatma zribi wrote:
Dear Bruce,
Would you mind tell me if there is a function of freesurfer that I can use to do the same step of qcache to smooth and interpolate in the fsaverage one subject with mri_surf2surf I can smooth only or align one subject with an average. thank you for you help. with best regards, Fatma
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what is your full command line? You can smooth and map with it (use -fwhm-src or fwhm-trg to smooth in either the source or target space) On Mon, 29 Jul 2013, fatma zribi wrote:
Dear Bruce, I have tried mri-surf2surf, it makes the result (smoothed curv for example) with the same dimension of the subject. But I would like a smoothed file with the dimesion of fsaverage.
Thank you for your help.
With best regards,
Fatma
2013/7/29 Bruce Fischl fischl@nmr.mgh.harvard.edu Hi Fatma
you can use mri_surf2surf within subject I believe, but Doug can confirm (although he's traveling so it may be a bit). You can also do it interactively in tksurfer. cheers Bruce On Mon, 29 Jul 2013, fatma zribi wrote: Dear Bruce, Would you mind tell me if there is a function of freesurfer that I can use to do the same step of qcache to smooth and interpolate in the fsaverage one subject with mri_surf2surf I can smooth only or align one subject with an average. thank you for you help. with best regards, FatmaThe information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu