what version are you using?

On Tue, 21 Mar 2006, Elizabeth Fenstermacher wrote:

Yes that's exactly what's happening. Well I'm sorry to hear that this is endemic now :(, but I'm glad I'm not crazy ...

On Tue, 21 Mar 2006, Bruce Fischl wrote:

...

Hi Eliz,

are they faulting in the middle of mri_ca_register? We've just started to have this problem (despite successfully running it on our 80 hemisphere test set!), and I'm tracking it down.

sorry :<

Bruce

On Tue, 21 Mar 2006, Elizabeth Fenstermacher wrote:

...

Hey All,

I have a few scans that I've been attempting to process that fail during autorecon2. I've eliminated all scan acquisitions that looked potentially problematic and attempted to rerun them. They both seem to go through autorecon1 without incident. The errors I'm getting are the somewhat ambiguous segmentation fault so I'm really not sure what manaul interventions should be attempted or might be useful to get them to run. Any suggestions would be greatly appreciated.

Scans: /autofs/space/elvin_007/users/mci1/mci1_recon/batch2/991101rl-new/ /autofs/space/elvin_007/users/mci1/mci1_recon/batch2/991122so-new/

Thanks Eliz _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Hi Eliz,

you're better of using stable for exactly this reason - we've tested it extensively and it works quite well. Dev is on the other hand definitely *not* stable.

Bruce On Tue, 21 Mar 2006, Elizabeth Fenstermacher wrote:

Hey Bruce,

I had been using the dev environment, but I'm rerunning them now in the stable per Nick's suggestion.

I didn't realize that it was an established, if relatively new, bug because I hadn't had problems before.

Eliz

On Tue, 21 Mar 2006, Bruce Fischl wrote:

...

what version are you using?

On Tue, 21 Mar 2006, Elizabeth Fenstermacher wrote:

...

Yes that's exactly what's happening. Well I'm sorry to hear that this is endemic now :(, but I'm glad I'm not crazy ...

On Tue, 21 Mar 2006, Bruce Fischl wrote:

...

Hi Eliz,

are they faulting in the middle of mri_ca_register? We've just started to have this problem (despite successfully running it on our 80 hemisphere test set!), and I'm tracking it down.

sorry :<

Bruce

On Tue, 21 Mar 2006, Elizabeth Fenstermacher wrote:

...

Hey All,

I have a few scans that I've been attempting to process that fail during autorecon2. I've eliminated all scan acquisitions that looked potentially problematic and attempted to rerun them. They both seem to go through autorecon1 without incident. The errors I'm getting are the somewhat ambiguous segmentation fault so I'm really not sure what manaul interventions should be attempted or might be useful to get them to run. Any suggestions would be greatly appreciated.

Scans: /autofs/space/elvin_007/users/mci1/mci1_recon/batch2/991101rl-new/ /autofs/space/elvin_007/users/mci1/mci1_recon/batch2/991122so-new/

Thanks Eliz _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer