Hi, Doug
I found from the archive that you made a version of make_average_surface without the need for aparc.annot. I tried to download it but the link is not valid anymore. Could you please send me a copy of the file? I need to generate an averaged surface for a group of non-human primates and I was asked to input these annotation files that do not exist for non-human primate data.
Many thanks! Leon
Re: [Freesurfer] how to generate aparc.annotion files?
Douglas N Greve Mon, 08 Nov 2010 09:55:49 -0800
It is needed in make_average_surface. I've created a new version that does not use the aparc (thought I have not tested it). You can get it from here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_surface.no-aparc
Make a backup of your current version of make_average_surface and then copy this one over it
douig
Doug is away so it may be a couple of days until he answers... On Wed, 11 Jul 2012, Leon wrote:
Hi, Doug
I found from the archive that you made a version of make_average_surface without the need for aparc.annot. I tried to download it but the link is not valid anymore. Could you please send me a copy of the file? I need to generate an averaged surface for a group of non-human primates and I was asked to input these annotation files that do not exist for non-human primate data.
Many thanks! Leon
Re: [Freesurfer] how to generate aparc.annotion files?
Douglas N Greve Mon, 08 Nov 2010 09:55:49 -0800
It is needed in make_average_surface. I've created a new version that does not use the aparc (thought I have not tested it). You can get it from here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_ surface.no-aparc
Make a backup of your current version of make_average_surface and then copy this one over it
douig
Hi, Bruce Thanks for the information. I can wait for his information after he comes back.
Best Leon
________________________________ From: Bruce Fischl fischl@nmr.mgh.harvard.edu To: Leon leonado78@yahoo.com Cc: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu; Douglas N Greve greve@nmr.mgh.harvard.edu Sent: Wednesday, July 11, 2012 4:23 PM Subject: Re: [Freesurfer] the make_average_subject without aparc.annot
Doug is away so it may be a couple of days until he answers... On Wed, 11 Jul 2012, Leon wrote:
Hi, Doug
I found from the archive that you made a version of make_average_surface without the need for aparc.annot. I tried to download it but the link is not valid anymore. Could you please send me a copy of the file? I need to generate an averaged surface for a group of non-human primates and I was asked to input these annotation files that do not exist for non-human primate data.
Many thanks! Leon
Re: [Freesurfer] how to generate aparc.annotion files?
Douglas N Greve Mon, 08 Nov 2010 09:55:49 -0800
It is needed in make_average_surface. I've created a new version that does not use the aparc (thought I have not tested it). You can get it from here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_ surface.no-aparc
Make a backup of your current version of make_average_surface and then copy this one over it
douig
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I don't remember what I sent out before, but you can try this version ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_surface doug
On 07/11/2012 03:37 PM, Leon wrote:
Hi, Doug
I found from the archive that you made a version of make_average_surface without the need for aparc.annot. I tried to download it but the link is not valid anymore. Could you please send me a copy of the file? I need to generate an averaged surface for a group of non-human primates and I was asked to input these annotation files that do not exist for non-human primate data.
Many thanks! Leon
Re: [Freesurfer] how to generate aparc.annotion files?
Douglas N Greve Mon, 08 Nov 2010 09:55:49 -0800
It is needed in make_average_surface. I've created a new version that does not use the aparc (thought I have not tested it). You can get it from here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_surface.no-aparc
Make a backup of your current version of make_average_surface and then copy this one over it
douig
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Douglas N Greve -
Leon