Dear all - For those who have been using TRACULA or are considering using it in the future, it is strongly recommended to use the new (and hopefully improved) version that will come out shortly with FreeSurfer 5.2.
For those who fear change and need some time to adjust, here's what to expect: http://surfer.nmr.mgh.harvard.edu/fswiki/Tracula#Updates
Best, a.y
Anastasia,
We have a set of MR data and all have the recon-all processing done in FreeSurfer version 5.1. Will we be able to use the results from the recon-all FreeSurfer version 5.1 for the new TRACULA version 5.2 or will we have to run recon-all in version 5.2 to use TRACULA version 5.2?
Thanks, Cyrus
-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Anastasia Yendiki Sent: Tuesday, February 19, 2013 11:00 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] changes in tracula in the upcoming freesurfer release 5.2
Dear all - For those who have been using TRACULA or are considering using it in the future, it is strongly recommended to use the new (and hopefully improved) version that will come out shortly with FreeSurfer 5.2.
For those who fear change and need some time to adjust, here's what to expect: http://surfer.nmr.mgh.harvard.edu/fswiki/Tracula#Updates
Best, a.y _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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Hi Cyrus - Great question! The only thing that tracula utilizes from the freesurfer recon is the aparc+aseg, and since I'm told that there have been no changes from 5.1 to 5.2 affecting how the aparc+aseg is generated, you'll be fine using either 5.1 or 5.2 freesurfer recons as input for the new version of tracula. Of course, if you see problems, do let us know.
Hope this helps, a.y
On Wed, 20 Feb 2013, Sarosh, Cyrus wrote:
Anastasia,
We have a set of MR data and all have the recon-all processing done in FreeSurfer version 5.1. Will we be able to use the results from the recon-all FreeSurfer version 5.1 for the new TRACULA version 5.2 or will we have to run recon-all in version 5.2 to use TRACULA version 5.2?
Thanks, Cyrus
-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Anastasia Yendiki Sent: Tuesday, February 19, 2013 11:00 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] changes in tracula in the upcoming freesurfer release 5.2
Dear all - For those who have been using TRACULA or are considering using it in the future, it is strongly recommended to use the new (and hopefully improved) version that will come out shortly with FreeSurfer 5.2.
For those who fear change and need some time to adjust, here's what to expect: http://surfer.nmr.mgh.harvard.edu/fswiki/Tracula#Updates
Best, a.y _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Anastasia Yendiki -
Sarosh, Cyrus