How can I get the the position of a tkr voxel in terms of the native voxel space?
My guess was:
pos = Torig*[C R S ones(size(S))]';% orig CRS to tkrRAS pos = P*pos;% tkrRAS to native RAS pos = W*bmsk;% native RAS to native CRS
Where, Torig is given by mri_info --vox2ras-tkr orig.mgz P is qiven by mri_info --tkr2scanner orig.mgz W is given by mri_info --ras2vox orig/001.mgz
But that is not returning expected values.
Thank you,
-Burke Rosen
freesurfer@nmr.mgh.harvard.edu