Hi Anand

have you run recon-all yet? Ideally you would give it a non-enhanced 3D T1 (like an mprage). We don't segment vessels though, for that you will need to use some other software.

cheers Bruce

On Mon, 19 Dec 2016, anand iyer wrote:

Hi Could you please help with this?

I am able to create a 3D model of brain with T1 volume. I want to superimpose the surface vessels from a T1 GAD. How do i go about it?

Thanks,

Anand Anand Iyer