I have what appear to be dicom files. The root directory of the CD ROM contains a file called dicomdir. The files are in a directory and named with non-consecutive 8-digit numbers. The directory is named with an 8 digit number as well. After converting the files to mgz format, running recon-all, and viewing the image, I see that the slices are not oriented correctly. In the coronal view, the image looks like a thin, incoherent stripe. In the sagital view there are several sagital slices and several coronal slices and most of the slices have no image on them. What is going on here?
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
Kerr, Catherine E. wrote:
I have what appear to be dicom files. The root directory of the CD ROM contains a file called dicomdir. The files are in a directory and named with non-consecutive 8-digit numbers. The directory is named with an 8 digit number as well. After converting the files to mgz format, running recon-all, and viewing the image, I see that the slices are not oriented correctly. In the coronal view, the image looks like a thin, incoherent stripe. In the sagital view there are several sagital slices and several coronal slices and most of the slices have no image on them. What is going on here?
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu