External Email - Use Caution
Hi,
I'm using the development version of FreeSurfer and am attempting to register two subjects using mri_cvs_register.
This is the command I ran:
mri_cvs_register --mov subjb/ --template subja/
Below was the outputted message:
The outdir: /home/vinny/Tools/freesurfer/subjects/subjb//cvs
Log file is /home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log
/home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log: No such file or directory.
Thanks,
Vinny
External Email - Use Caution
Hi Check your subject and template address directory.
On Sat, 16 Nov 2019, 01:05 Vinny K <vinit.k.srivastava@gmail.com wrote:
External Email - Use CautionHi,
I'm using the development version of FreeSurfer and am attempting to register two subjects using mri_cvs_register.
This is the command I ran:
mri_cvs_register --mov subjb/ --template subja/
Below was the outputted message:
The outdir: /home/vinny/Tools/freesurfer/subjects/subjb//cvs
Log file is /home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log
/home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log: No such file or directory.
Thanks,
Vinny _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
Hi,
The moving subjectid directory (subjb) has a cvs folder written but it is empty.
The template subjectid directory has the normal folder structure after recon-all.
[image: moving.png] [image: template.png]
On Fri, Nov 15, 2019 at 9:54 PM Nader Razmara naderinst@gmail.com wrote:
External Email - Use CautionHi Check your subject and template address directory.
On Sat, 16 Nov 2019, 01:05 Vinny K <vinit.k.srivastava@gmail.com wrote:
External Email - Use CautionHi,
I'm using the development version of FreeSurfer and am attempting to register two subjects using mri_cvs_register.
This is the command I ran:
mri_cvs_register --mov subjb/ --template subja/
Below was the outputted message:
The outdir: /home/vinny/Tools/freesurfer/subjects/subjb//cvs
Log file is /home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log
/home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log: No such file or directory.
Thanks,
Vinny _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
Hi,
I figured out the mistake. I had to remove the forward slashes from the command line. Its running fine now.
Thanks,
Vinny
On Sat, Nov 16, 2019 at 12:13 AM Vinny K vinit.k.srivastava@gmail.com wrote:
Hi,
The moving subjectid directory (subjb) has a cvs folder written but it is empty.
The template subjectid directory has the normal folder structure after recon-all.
[image: moving.png] [image: template.png]
On Fri, Nov 15, 2019 at 9:54 PM Nader Razmara naderinst@gmail.com wrote:
External Email - Use CautionHi Check your subject and template address directory.
On Sat, 16 Nov 2019, 01:05 Vinny K <vinit.k.srivastava@gmail.com wrote:
External Email - Use CautionHi,
I'm using the development version of FreeSurfer and am attempting to register two subjects using mri_cvs_register.
This is the command I ran:
mri_cvs_register --mov subjb/ --template subja/
Below was the outputted message:
The outdir: /home/vinny/Tools/freesurfer/subjects/subjb//cvs
Log file is /home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log
/home/vinny/Tools/freesurfer/subjects/subjb//cvs/subjb/_to_subja/.mri_cvs_register.1911151623.log: No such file or directory.
Thanks,
Vinny _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu