External Email - Use Caution
Hi,
Any reason why my participant is not creating hippocampal subfield data?
Thank you
Lisa
________________________________
This message may contain confidential information and is for the sole use of the intended recipient(s). If you are not the intended recipient, do not use, distribute, or copy this e-mail. Please notify the UC Irvine Health – Compliance and Privacy Office via email at hacompliance@uci.edu or by phone 888-456-7006 immediately if you have received this e-mail in error. E-mail transmission cannot be guaranteed to be secure or error-free as information could be intercepted, corrupted, lost, destroyed, arrive late or incomplete, or contain viruses. The sender therefore does not accept liability for any errors or omissions in the contents of this message, which arise as a result of e-mail transmission.
Dear Lisa, Is it possible that you’re running out of RAM memory? How much RAM do you have available? Cheers, Eugenio Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
On Dec 10, 2021, at 14:19, Taylor, Lisa <ltaylor2@hs.uci.edumailto:ltaylor2@hs.uci.edu> wrote:
External Email - Use Caution
Hi,
Any reason why my participant is not creating hippocampal subfield data?
Thank you
Lisa
________________________________
This message may contain confidential information and is for the sole use of the intended recipient(s). If you are not the intended recipient, do not use, distribute, or copy this e-mail. Please notify the UC Irvine Health – Compliance and Privacy Office via email at hacompliance@uci.edumailto:hacompliance@uci.edu or by phone 888-456-7006 immediately if you have received this e-mail in error. E-mail transmission cannot be guaranteed to be secure or error-free as information could be intercepted, corrupted, lost, destroyed, arrive late or incomplete, or contain viruses. The sender therefore does not accept liability for any errors or omissions in the contents of this message, which arise as a result of e-mail transmission. <hippocampal-subfields-T1.log>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
Hi Juan,
Thank you.
I don't believe so. I reran freesurfer on this participant with another participant on the same day on our HPC. This participant did not populate the data while the other did populate the data, so I am not sure if there is something innate with the scan that is causing the problem, or something else? ________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Iglesias Gonzalez, Juan E. JIGLESIASGONZALEZ@mgh.harvard.edu Sent: Friday, December 10, 2021 11:22 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Hippocampal subfield data
Dear Lisa, Is it possible that you’re running out of RAM memory? How much RAM do you have available? Cheers, Eugenio Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://secure-web.cisco.com/1EpssHTdnx136bsFlaSi2FeYOAwdlljBBEhbBdpUCnjuo8fl...https://secure-web.cisco.com/177inhbB3wHtl1bOWEUIl1CxnDyw-glGwEZSinHZTGtCCmE_vQ9CQiuh8w-qdJ1mc82ObQICYmUrDBhzQsJg5rJUHP17hd1QV0CHpKgJ7XkhWZCQ4WQAfQCjkOB6u40qbXHqc75Euly8t37EjNMgSJf3Ptx2YxadtvSqVF9ikzIvfsTXkszPHGgk_URUEb0_zrwkJQF6GAvoFtyprJSxgmsKQqX34C9jBU-cDQCO5MEaPfiRMPn7CCWFLfv_K0GM92Ej9Hl9Okq8_JWauU_pB5prviU5WPBsEQ_ZUZfkz052ZO1JTiy3tFdR0zJzxw99Z-ERgQ6PWGrIlHLes8SwkSw/https%3A%2F%2Furldefense.com%2Fv3%2F__http%3A%2F%2Fwww.jeiglesias.com__%3B%21%21OLgoXmg%21ACyo4RVHXSATkHMra8kVesEvPxFC51I_HPwwfE-QJvFQtVhzwd4MNLQGLYPwontwlgQ%24
On Dec 10, 2021, at 14:19, Taylor, Lisa <ltaylor2@hs.uci.edumailto:ltaylor2@hs.uci.edu> wrote:
External Email - Use Caution
Hi,
Any reason why my participant is not creating hippocampal subfield data?
Thank you
Lisa
________________________________
This message may contain confidential information and is for the sole use of the intended recipient(s). If you are not the intended recipient, do not use, distribute, or copy this e-mail. Please notify the UC Irvine Health – Compliance and Privacy Office via email at hacompliance@uci.edumailto:hacompliance@uci.edu or by phone 888-456-7006 immediately if you have received this e-mail in error. E-mail transmission cannot be guaranteed to be secure or error-free as information could be intercepted, corrupted, lost, destroyed, arrive late or incomplete, or contain viruses. The sender therefore does not accept liability for any errors or omissions in the contents of this message, which arise as a result of e-mail transmission. <hippocampal-subfields-T1.log>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1pv979vuPcvkTixkEc-X5DA4AWX6akYjLIn5aQKWwn9iOB9...https://secure-web.cisco.com/1-0ZcVirYiwecR0uNCt2YgZky_Csh5eo7IDKaXz708FulIceZaT84NiT0DAAUgI7bnAmH3-MTiq2lst4puXTwUCYG4gNvngXJ-hP3JvdfBEbHmMTazwrEPhxR02qmve3C4Wf8tUQoxVqYWjgLQXR3QeyZZXWXKW6par2uFjM6jKi6Hn5tmGltHnZcjGTRQfF_X2z9XnSrUel2rStqqZ4igjN9nwpm0YEbhAU6CKUjAh6X5PmSig5pym8xnIZlitSBego2W4LckzcTmhqRJSCKE339Lm5iUC12NsiZukLx9XvVPQaadkIdNtJVlBy6EZSvZV5sELxoah9T2Hstqy97ZA/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer__%3B%21%21OLgoXmg%21ACyo4RVHXSATkHMra8kVesEvPxFC51I_HPwwfE-QJvFQtVhzwd4MNLQGLYPwYM5ZQok%24
. WARNING - This email originated from outside of the UCI Health email system. Do not click any links and do not open attachments unless you can confirm the sender. PLEASE FORWARD SUSPICIOUS EMAILS TO: security@hs.uci.edu .
________________________________
This message may contain confidential information and is for the sole use of the intended recipient(s). If you are not the intended recipient, do not use, distribute, or copy this e-mail. Please notify the UC Irvine Health – Compliance and Privacy Office via email at hacompliance@uci.edu or by phone 888-456-7006 immediately if you have received this e-mail in error. E-mail transmission cannot be guaranteed to be secure or error-free as information could be intercepted, corrupted, lost, destroyed, arrive late or incomplete, or contain viruses. The sender therefore does not accept liability for any errors or omissions in the contents of this message, which arise as a result of e-mail transmission.
It could be that your memory allocation is right on the edge of the requirements, and some subjects go over the bounds while others do not. Is it a possibility to allocate more RAM for your jobs? Cheers, /E
Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
On Dec 10, 2021, at 14:35, Taylor, Lisa <ltaylor2@hs.uci.edumailto:ltaylor2@hs.uci.edu> wrote:
External Email - Use Caution
Hi Juan,
Thank you.
I don't believe so. I reran freesurfer on this participant with another participant on the same day on our HPC. This participant did not populate the data while the other did populate the data, so I am not sure if there is something innate with the scan that is causing the problem, or something else? ________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Iglesias Gonzalez, Juan E. <JIGLESIASGONZALEZ@mgh.harvard.edumailto:JIGLESIASGONZALEZ@mgh.harvard.edu> Sent: Friday, December 10, 2021 11:22 AM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Hippocampal subfield data
Dear Lisa, Is it possible that you’re running out of RAM memory? How much RAM do you have available? Cheers, Eugenio Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be http://www.jeiglesias.comhttps://secure-web.cisco.com/177inhbB3wHtl1bOWEUIl1CxnDyw-glGwEZSinHZTGtCCmE_vQ9CQiuh8w-qdJ1mc82ObQICYmUrDBhzQsJg5rJUHP17hd1QV0CHpKgJ7XkhWZCQ4WQAfQCjkOB6u40qbXHqc75Euly8t37EjNMgSJf3Ptx2YxadtvSqVF9ikzIvfsTXkszPHGgk_URUEb0_zrwkJQF6GAvoFtyprJSxgmsKQqX34C9jBU-cDQCO5MEaPfiRMPn7CCWFLfv_K0GM92Ej9Hl9Okq8_JWauU_pB5prviU5WPBsEQ_ZUZfkz052ZO1JTiy3tFdR0zJzxw99Z-ERgQ6PWGrIlHLes8SwkSw/https%3A%2F%2Furldefense.com%2Fv3%2F__http%3A%2F%2Fwww.jeiglesias.com__%3B%21%21OLgoXmg%21ACyo4RVHXSATkHMra8kVesEvPxFC51I_HPwwfE-QJvFQtVhzwd4MNLQGLYPwontwlgQ%24
On Dec 10, 2021, at 14:19, Taylor, Lisa <ltaylor2@hs.uci.edumailto:ltaylor2@hs.uci.edu> wrote:
External Email - Use Caution
Hi,
Any reason why my participant is not creating hippocampal subfield data?
Thank you
Lisa
________________________________
This message may contain confidential information and is for the sole use of the intended recipient(s). If you are not the intended recipient, do not use, distribute, or copy this e-mail. Please notify the UC Irvine Health – Compliance and Privacy Office via email at hacompliance@uci.edumailto:hacompliance@uci.edu or by phone 888-456-7006 immediately if you have received this e-mail in error. E-mail transmission cannot be guaranteed to be secure or error-free as information could be intercepted, corrupted, lost, destroyed, arrive late or incomplete, or contain viruses. The sender therefore does not accept liability for any errors or omissions in the contents of this message, which arise as a result of e-mail transmission. <hippocampal-subfields-T1.log>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurferhttps://secure-web.cisco.com/1-0ZcVirYiwecR0uNCt2YgZky_Csh5eo7IDKaXz708FulIceZaT84NiT0DAAUgI7bnAmH3-MTiq2lst4puXTwUCYG4gNvngXJ-hP3JvdfBEbHmMTazwrEPhxR02qmve3C4Wf8tUQoxVqYWjgLQXR3QeyZZXWXKW6par2uFjM6jKi6Hn5tmGltHnZcjGTRQfF_X2z9XnSrUel2rStqqZ4igjN9nwpm0YEbhAU6CKUjAh6X5PmSig5pym8xnIZlitSBego2W4LckzcTmhqRJSCKE339Lm5iUC12NsiZukLx9XvVPQaadkIdNtJVlBy6EZSvZV5sELxoah9T2Hstqy97ZA/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer__%3B%21%21OLgoXmg%21ACyo4RVHXSATkHMra8kVesEvPxFC51I_HPwwfE-QJvFQtVhzwd4MNLQGLYPwYM5ZQok%24
. WARNING - This email originated from outside of the UCI Health email system. Do not click any links and do not open attachments unless you can confirm the sender. PLEASE FORWARD SUSPICIOUS EMAILS TO: security@hs.uci.edumailto:security@hs.uci.edu .
________________________________
This message may contain confidential information and is for the sole use of the intended recipient(s). If you are not the intended recipient, do not use, distribute, or copy this e-mail. Please notify the UC Irvine Health – Compliance and Privacy Office via email at hacompliance@uci.edumailto:hacompliance@uci.edu or by phone 888-456-7006 immediately if you have received this e-mail in error. E-mail transmission cannot be guaranteed to be secure or error-free as information could be intercepted, corrupted, lost, destroyed, arrive late or incomplete, or contain viruses. The sender therefore does not accept liability for any errors or omissions in the contents of this message, which arise as a result of e-mail transmission. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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