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Hi
Can someone please give the definitions for the following anatomical features obtained from freesurger aseg.stats ?
Are they thickness or area or volume measures ?
- anatomy_Left-Lateral-Ventricle - anatomy_Left-Inf-Lat-Vent - anatomy_Left-Cerebellum-White-Matter - anatomy_Left-Cerebellum-Cortex - anatomy_Left-Thalamus-Proper - anatomy_Left-Caudate - anatomy_Left-Putamen - anatomy_Left-Pallidum - anatomy_3rd-Ventricle - anatomy_4th-Ventricle - anatomy_Brain-Stem - anatomy_Left-Hippocampus - anatomy_Left-Amygdala - anatomy_CSF - anatomy_Left-Lateral-Ventricle - anatomy_Left-Inf-Lat-Vent - anatomy_Left-Cerebellum-White-Matter - anatomy_Left-Cerebellum-Cortex - anatomy_Left-Thalamus-Proper - anatomy_Left-Caudate - anatomy_Left-Putamen - anatomy_Left-Pallidum - anatomy_3rd-Ventricle - anatomy_4th-Ventricle - anatomy_Brain-Stem - anatomy_Left-Hippocampus - anatomy_Left-Amygdala - anatomy_CSF - anatomy_Left-VentralDC - anatomy_Left-vessel - anatomy_Left-choroid-plexus - anatomy_Right-Lateral-Ventricle - anatomy_Right-Inf-Lat-Vent - anatomy_Right-Cerebellum-White-Matter - anatomy_Right-Cerebellum-Cortex - anatomy_Right-Thalamus-Proper - anatomy_Right-Caudate - anatomy_Right-Putamen - anatomy_Right-Pallidum - anatomy_Right-Hippocampus - anatomy_Right-Amygdala - anatomy_Right-VentralDC - anatomy_Right-vessel - anatomy_Right-choroid-plexus - anatomy_5th-Ventricle - anatomy_WM-hypointensities - anatomy_Left-WM-hypointensities - anatomy_Right-WM-hypointensities - anatomy_non-WM-hypointensities - anatomy_Left-non-WM-hypointensities - anatomy_Right-non-WM-hypointensities - anatomy_Optic-Chiasm - anatomy_CC_Posterior - anatomy_CC_Mid_Posterior - anatomy_CC_Central - anatomy_CC_Mid_Anterior - anatomy_CC_Anterior
Thanks S.V
Hi S.V
they are all volumes I think. The definitions can be found in various Kennedy/Caviness papers (which we cite in our original 2002 aseg paper in Neuron).
cheers Bruce
On Fri, 18 May 2018, SJ JV wrote:
External Email - Use Caution
Hi Can someone please give the definitions for the following anatomical features obtained from freesurger aseg.stats ?
Are they thickness or area or volume measures ?
- anatomy_Left-Lateral-Ventricle
- anatomy_Left-Inf-Lat-Vent
- anatomy_Left-Cerebellum-White-Matter
- anatomy_Left-Cerebellum-Cortex
- anatomy_Left-Thalamus-Proper
- anatomy_Left-Caudate
- anatomy_Left-Putamen
- anatomy_Left-Pallidum
- anatomy_3rd-Ventricle
- anatomy_4th-Ventricle
- anatomy_Brain-Stem
- anatomy_Left-Hippocampus
- anatomy_Left-Amygdala
- anatomy_CSF
- anatomy_Left-Lateral-Ventricle
- anatomy_Left-Inf-Lat-Vent
- anatomy_Left-Cerebellum-White-Matter
- anatomy_Left-Cerebellum-Cortex
- anatomy_Left-Thalamus-Proper
- anatomy_Left-Caudate
- anatomy_Left-Putamen
- anatomy_Left-Pallidum
- anatomy_3rd-Ventricle
- anatomy_4th-Ventricle
- anatomy_Brain-Stem
- anatomy_Left-Hippocampus
- anatomy_Left-Amygdala
- anatomy_CSF
- anatomy_Left-VentralDC
- anatomy_Left-vessel
- anatomy_Left-choroid-plexus
- anatomy_Right-Lateral-Ventricle
- anatomy_Right-Inf-Lat-Vent
- anatomy_Right-Cerebellum-White-Matter
- anatomy_Right-Cerebellum-Cortex
- anatomy_Right-Thalamus-Proper
- anatomy_Right-Caudate
- anatomy_Right-Putamen
- anatomy_Right-Pallidum
- anatomy_Right-Hippocampus
- anatomy_Right-Amygdala
- anatomy_Right-VentralDC
- anatomy_Right-vessel
- anatomy_Right-choroid-plexus
- anatomy_5th-Ventricle
- anatomy_WM-hypointensities
- anatomy_Left-WM-hypointensities
- anatomy_Right-WM-hypointensities
- anatomy_non-WM-hypointensities
- anatomy_Left-non-WM-hypointensities
- anatomy_Right-non-WM-hypointensities
- anatomy_Optic-Chiasm
- anatomy_CC_Posterior
- anatomy_CC_Mid_Posterior
- anatomy_CC_Central
- anatomy_CC_Mid_Anterior
- anatomy_CC_Anterior
Thanks S.V
-- U
freesurfer@nmr.mgh.harvard.edu