We are using the development version of freesurfer in our lab for segmenting brains. In the parcellation process, the superior temporal gyrus is labeled as a whole, but specific parts of the STG including the planum temporale (which we need) are not being labeled.
The labeling process used is curvature.buckner40.filled.desikan_killany. If we use a different labeling process, such as atlas2005, will these structures be labeled? If not, is there another way to approach this problem?
Thanks.
Erin Slason Professional Research Assistant Neuromagnetic Imaging Center Department of Psychiatry University of Colorado Health Sciences Center 303-315-5459 Erin.Slason@uchsc.edu
Hi Erin,
I guess if you wanted to manually divvy up the STG we could rebuild an atlas for you.
cheers, Bruce
On Wed, 12 Oct 2005, Erin.Slason@uchsc.edu wrote:
We are using the development version of freesurfer in our lab for segmenting brains. In the parcellation process, the superior temporal gyrus is labeled as a whole, but specific parts of the STG including the planum temporale (which we need) are not being labeled.
The labeling process used is curvature.buckner40.filled.desikan_killany. If we use a different labeling process, such as atlas2005, will these structures be labeled? If not, is there another way to approach this problem?
Thanks.
Erin Slason Professional Research Assistant Neuromagnetic Imaging Center Department of Psychiatry University of Colorado Health Sciences Center 303-315-5459 Erin.Slason@uchsc.edu
freesurfer@nmr.mgh.harvard.edu
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Bruce Fischl -
Erin.Slason＠UCHSC.edu