yeah, it didn't work
From: ppj@netfilter.com.br Date: Tue, 18 Aug 2009 19:46:02 -0300 Subject: Re: [Freesurfer] a "redraw failed: no gl window open" problem To: freesurfer_zg@hotmail.com
I suppose you have tried the trick bellow
setenv doublebuffer_flag 1----------------------------------------------------------- Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom
--- Novo Netfilter 3.0 www.Netfilter.com.br --- New Netfilter Small Business
2009/8/18 Guang Zeng freesurfer_zg@hotmail.com
Hi, there,
I am still facing the problem of "redraw failed: no gl window open", I got another linux machine with Nvidia graphic card, I ran the tksurfer command "tksurfer bert lh inflated", it still gave me the "redraw failed: no gl window open" error.
surfer: current subjects dir: /home/m047599/freesurfer-install/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to:
surfer: /home/m047599 surfer: Reading header info from /home/m047599/freesurfer-install/freesurfer/subjects/bert/mri/T1.mgz surfer: vertices=131369, faces=262734 Loading /home/m047599/freesurfer-install/freesurfer/surface_labels.txt
surfer: ### redraw failed: no gl window open surfer: double buffered window surfer: tkoInitWindow(bert) surfer: using interface /home/m047599/freesurfer-install/freesurfer/lib/tcl/tksurfer.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_common.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_wrappers.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/fsgdfPlot.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkUtils.tcl
Successfully parsed tksurfer.tcl reading white matter vertex locations...
I read a previously posted thread by Nick, it looks like we can download a new tksurfer.bin file to solve this problem at ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/stable/centos4_x86_64
But I clicked the link, the file has been removed. Does any one can help me get the new link of this file?
Thanks a lot!
Guang
Windows Live: Keep your friends up to date with what you do online. Find out more.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_________________________________________________________________ Hotmail® is up to 70% faster. Now good news travels really fast. http://windowslive.com/online/hotmail?ocid=PID23391::T:WLMTAGL:ON:WL:en-US:W...
Guang,
which version of freesurfer are you running?
does glxgears work?
can you send me your /etc/X11/xorg.conf file?
Nick
On Tue, 2009-08-18 at 17:53 -0500, Guang Zeng wrote:
yeah, it didn't work
From: ppj@netfilter.com.br Date: Tue, 18 Aug 2009 19:46:02 -0300 Subject: Re: [Freesurfer] a "redraw failed: no gl window open" problem To: freesurfer_zg@hotmail.com
I suppose you have tried the trick bellow
setenv doublebuffer_flag 1
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- New Netfilter Small Business
2009/8/18 Guang Zeng freesurfer_zg@hotmail.com Hi, there,
I am still facing the problem of "redraw failed: no gl window open", I got another linux machine with Nvidia graphic card, I ran the tksurfer command "tksurfer bert lh inflated", it still gave me the "redraw failed: no gl window open" error. surfer: current subjects dir: /home/m047599/freesurfer-install/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /home/m047599 surfer: Reading header info from /home/m047599/freesurfer-install/freesurfer/subjects/bert/mri/T1.mgz surfer: vertices=131369, faces=262734 Loading /home/m047599/freesurfer-install/freesurfer/surface_labels.txt surfer: ### redraw failed: no gl window open surfer: double buffered window surfer: tkoInitWindow(bert) surfer: using interface /home/m047599/freesurfer-install/freesurfer/lib/tcl/tksurfer.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_common.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_wrappers.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/fsgdfPlot.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkUtils.tcl Successfully parsed tksurfer.tcl reading white matter vertex locations... I read a previously posted thread by Nick, it looks like we can download a new tksurfer.bin file to solve this problem at ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/stable/centos4_x86_64 But I clicked the link, the file has been removed. Does any one can help me get the new link of this file? Thanks a lot! Guang ______________________________________________________________ Windows Live: Keep your friends up to date with what you do online. Find out more. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hotmail® is up to 70% faster. Now good news travels really fast. Try it now. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hello, Nick,
The freesurfer I am using now is freesurfer-Linux-centos4_x86_64-stable-pub-v4.5.0-full.tar.gz Yes, the glxgears work well.
Guang
Subject: Re: [Freesurfer] a "redraw failed: no gl window open" problem From: nicks@nmr.mgh.harvard.edu To: freesurfer_zg@hotmail.com CC: freesurfer@nmr.mgh.harvard.edu Date: Tue, 18 Aug 2009 19:27:11 -0400
Guang,
which version of freesurfer are you running?
does glxgears work?
can you send me your /etc/X11/xorg.conf file?
Nick
On Tue, 2009-08-18 at 17:53 -0500, Guang Zeng wrote:
yeah, it didn't work
From: ppj@netfilter.com.br Date: Tue, 18 Aug 2009 19:46:02 -0300 Subject: Re: [Freesurfer] a "redraw failed: no gl window open" problem To: freesurfer_zg@hotmail.com
I suppose you have tried the trick bellow
setenv doublebuffer_flag 1
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- New Netfilter Small Business
2009/8/18 Guang Zeng freesurfer_zg@hotmail.com Hi, there,
I am still facing the problem of "redraw failed: no gl window open", I got another linux machine with Nvidia graphic card, I ran the tksurfer command "tksurfer bert lh inflated", it still gave me the "redraw failed: no gl window open" error. surfer: current subjects dir: /home/m047599/freesurfer-install/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /home/m047599 surfer: Reading header info from /home/m047599/freesurfer-install/freesurfer/subjects/bert/mri/T1.mgz surfer: vertices=131369, faces=262734 Loading /home/m047599/freesurfer-install/freesurfer/surface_labels.txt surfer: ### redraw failed: no gl window open surfer: double buffered window surfer: tkoInitWindow(bert) surfer: using interface /home/m047599/freesurfer-install/freesurfer/lib/tcl/tksurfer.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_common.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_wrappers.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/fsgdfPlot.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkUtils.tcl Successfully parsed tksurfer.tcl reading white matter vertex locations... I read a previously posted thread by Nick, it looks like we can download a new tksurfer.bin file to solve this problem at ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/stable/centos4_x86_64 But I clicked the link, the file has been removed. Does any one can help me get the new link of this file? Thanks a lot! Guang ______________________________________________________________ Windows Live: Keep your friends up to date with what you do online. Find out more. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hotmail® is up to 70% faster. Now good news travels really fast. Try it now. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_________________________________________________________________ Windows Live: Keep your friends up to date with what you do online. http://windowslive.com/Campaign/SocialNetworking?ocid=PID23285::T:WLMTAGL:ON...
Guang,
Ok, v4.5.0 is in use. So the tksurfer.bin fix mentioned in email is no longer necessary. Instead, in the /etc/X11/xorg.conf file, try changing this line:
Depth 16
to this:
Depth 24
and then logout and login again (or press Crtl-Alt-Backspace to reset X11).
Nick
On Wed, 2009-08-19 at 01:27 -0500, Guang Zeng wrote:
Hello, Nick,
The freesurfer I am using now is freesurfer-Linux-centos4_x86_64-stable-pub-v4.5.0-full.tar.gz Yes, the glxgears work well.
Guang
Subject: Re: [Freesurfer] a "redraw failed: no gl window open"
problem
From: nicks@nmr.mgh.harvard.edu To: freesurfer_zg@hotmail.com CC: freesurfer@nmr.mgh.harvard.edu Date: Tue, 18 Aug 2009 19:27:11 -0400
Guang,
which version of freesurfer are you running?
does glxgears work?
can you send me your /etc/X11/xorg.conf file?
Nick
On Tue, 2009-08-18 at 17:53 -0500, Guang Zeng wrote:
yeah, it didn't work
From: ppj@netfilter.com.br Date: Tue, 18 Aug 2009 19:46:02 -0300 Subject: Re: [Freesurfer] a "redraw failed: no gl window open"
problem
To: freesurfer_zg@hotmail.com
I suppose you have tried the trick bellow
setenv doublebuffer_flag 1
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- New Netfilter Small Business
2009/8/18 Guang Zeng freesurfer_zg@hotmail.com Hi, there,
I am still facing the problem of "redraw failed: no gl window open", I got another linux machine with Nvidia graphic card, I ran the tksurfer command "tksurfer bert lh inflated", it still gave me the "redraw failed: no gl window open" error.
surfer: current subjects dir: /home/m047599/freesurfer-install/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /home/m047599 surfer: Reading header info
from /home/m047599/freesurfer-install/freesurfer/subjects/bert/mri/T1.mgz
surfer: vertices=131369, faces=262734
Loading /home/m047599/freesurfer-install/freesurfer/surface_labels.txt
surfer: ### redraw failed: no gl window open surfer: double buffered window surfer: tkoInitWindow(bert) surfer: using
interface /home/m047599/freesurfer-install/freesurfer/lib/tcl/tksurfer.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_common.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_wrappers.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/fsgdfPlot.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkUtils.tcl
Successfully parsed tksurfer.tcl reading white matter vertex locations...
I read a previously posted thread by Nick, it looks like we can download a new tksurfer.bin file to solve this problem at
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/stable/centos4_x86_64
But I clicked the link, the file has been removed. Does any one can help me get the new link of this file?
Thanks a lot!
Guang
Windows Live: Keep your friends up to date with what you do online. Find out more.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hotmail® is up to 70% faster. Now good news travels really fast.
Try
it now. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Windows Live: Keep your friends up to date with what you do online. Find out more.
Hi, Nick,
I forgot to attach the xorg.cong file, it is here. Thanks!
# nvidia-xconfig: X configuration file generated by nvidia-xconfig # nvidia-xconfig: version 1.0 (buildmeister@builder26) Wed Mar 29 15:31:59 PST 2006 # Xorg configuration created by system-config-display
Section "ServerLayout" Identifier "Default Layout" Screen 0 "Screen0" 0 0 InputDevice "Mouse0" "CorePointer" InputDevice "Keyboard0" "CoreKeyboard" EndSection
Section "Files"
# RgbPath is the location of the RGB database. Note, this is the name of the # file minus the extension (like ".txt" or ".db"). There is normally # no need to change the default. # Multiple FontPath entries are allowed (they are concatenated together) # By default, Red Hat 6.0 and later now use a font server independent of # the X server to render fonts. RgbPath "/usr/X11R6/lib/X11/rgb" FontPath "unix/:7100" EndSection
Section "Module" Load "dbe" Load "extmod" Load "fbdevhw" Load "glx" Load "record" Load "freetype" Load "type1" Load "dri" EndSection
Section "ServerFlags" Option "AllowMouseOpenFail" "yes" EndSection
Section "InputDevice"
# Specify which keyboard LEDs can be user-controlled (eg, with xset(1)) # Option "Xleds" "1 2 3" # To disable the XKEYBOARD extension, uncomment XkbDisable. # Option "XkbDisable" # To customise the XKB settings to suit your keyboard, modify the # lines below (which are the defaults). For example, for a non-U.S. # keyboard, you will probably want to use: # Option "XkbModel" "pc102" # If you have a US Microsoft Natural keyboard, you can use: # Option "XkbModel" "microsoft" # # Then to change the language, change the Layout setting. # For example, a german layout can be obtained with: # Option "XkbLayout" "de" # or: # Option "XkbLayout" "de" # Option "XkbVariant" "nodeadkeys" # # If you'd like to switch the positions of your capslock and # control keys, use: # Option "XkbOptions" "ctrl:swapcaps" # Or if you just want both to be control, use: # Option "XkbOptions" "ctrl:nocaps" # Identifier "Keyboard0" Driver "kbd" Option "XkbModel" "pc105" Option "XkbLayout" "us" EndSection
Section "InputDevice" Identifier "Mouse0" Driver "mouse" Option "Protocol" "IMPS/2" Option "Device" "/dev/input/mice" Option "ZAxisMapping" "4 5" Option "Emulate3Buttons" "no" EndSection
Section "Monitor" Identifier "Monitor0" VendorName "Monitor Vendor" ModelName "Unknown monitor" HorizSync 31.0 - 54.0 VertRefresh 50.0 - 120.0 Option "dpms" EndSection
Section "Device" Identifier "Videocard0" Driver "nvidia" VendorName "Videocard vendor" BoardName "NVIDIA Quadro FX 4400" EndSection
Section "Screen" Identifier "Screen0" Device "Videocard0" Monitor "Monitor0" DefaultDepth 24 Option "NvAGP" "1" Option "TwinView" "true" Option "SecondMonitorHorizSync" "31.0 - 80.0" Option "SecondMonitorVertRefresh" "56.0 - 76.0" Option "MetaModes" "1600x1200, 1600x1200; 1280x1024, 1280x1024; 1280x1024, 1280x1024;" Option "TwinViewOrientation" "RightOf" Option "Xinerama" "on" SubSection "Display" Viewport 0 0 Depth 16 Modes "1024x768" "800x600" "640x480" EndSubSection SubSection "Display" Viewport 0 0 Depth 24 Modes "1024x768" "800x600" "640x480" EndSubSection EndSection
Subject: Re: [Freesurfer] a "redraw failed: no gl window open" problem From: nicks@nmr.mgh.harvard.edu To: freesurfer_zg@hotmail.com CC: freesurfer@nmr.mgh.harvard.edu Date: Tue, 18 Aug 2009 19:27:11 -0400
Guang,
which version of freesurfer are you running?
does glxgears work?
can you send me your /etc/X11/xorg.conf file?
Nick
On Tue, 2009-08-18 at 17:53 -0500, Guang Zeng wrote:
yeah, it didn't work
From: ppj@netfilter.com.br Date: Tue, 18 Aug 2009 19:46:02 -0300 Subject: Re: [Freesurfer] a "redraw failed: no gl window open" problem To: freesurfer_zg@hotmail.com
I suppose you have tried the trick bellow
setenv doublebuffer_flag 1
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- New Netfilter Small Business
2009/8/18 Guang Zeng freesurfer_zg@hotmail.com Hi, there,
I am still facing the problem of "redraw failed: no gl window open", I got another linux machine with Nvidia graphic card, I ran the tksurfer command "tksurfer bert lh inflated", it still gave me the "redraw failed: no gl window open" error. surfer: current subjects dir: /home/m047599/freesurfer-install/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /home/m047599 surfer: Reading header info from /home/m047599/freesurfer-install/freesurfer/subjects/bert/mri/T1.mgz surfer: vertices=131369, faces=262734 Loading /home/m047599/freesurfer-install/freesurfer/surface_labels.txt surfer: ### redraw failed: no gl window open surfer: double buffered window surfer: tkoInitWindow(bert) surfer: using interface /home/m047599/freesurfer-install/freesurfer/lib/tcl/tksurfer.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_common.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_wrappers.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/fsgdfPlot.tcl Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkUtils.tcl Successfully parsed tksurfer.tcl reading white matter vertex locations... I read a previously posted thread by Nick, it looks like we can download a new tksurfer.bin file to solve this problem at ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/stable/centos4_x86_64 But I clicked the link, the file has been removed. Does any one can help me get the new link of this file? Thanks a lot! Guang ______________________________________________________________ Windows Live: Keep your friends up to date with what you do online. Find out more. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hotmail® is up to 70% faster. Now good news travels really fast. Try it now. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_________________________________________________________________ Hotmail® is up to 70% faster. Now good news travels really fast. http://windowslive.com/online/hotmail?ocid=PID23391::T:WLMTAGL:ON:WL:en-US:W...
Guang,
In the xorg.conf file, I noticed one of the Display depths is '16'. This should be set to '24' to ensure full color depth.
Also, the email doesnt mention which freesurfer version is being used. In short, that tksurfer.bin link that was mentioned is no longer necessary with the new versions (4.3 and newer i think).
Nick
On Wed, 2009-08-19 at 08:25 -0500, Guang Zeng wrote:
Hi, Nick,
I forgot to attach the xorg.cong file, it is here. Thanks!
# nvidia-xconfig: X configuration file generated by nvidia-xconfig # nvidia-xconfig: version 1.0 (buildmeister@builder26) Wed Mar 29 15:31:59 PST 2006 # Xorg configuration created by system-config-display
Section "ServerLayout" Identifier "Default Layout" Screen 0 "Screen0" 0 0 InputDevice "Mouse0" "CorePointer" InputDevice "Keyboard0" "CoreKeyboard" EndSection
Section "Files"
# RgbPath is the location of the RGB database. Note, this is the name of the # file minus the extension (like ".txt" or ".db"). There is normally # no need to change the default. # Multiple FontPath entries are allowed (they are concatenated together) # By default, Red Hat 6.0 and later now use a font server independent of # the X server to render fonts. RgbPath "/usr/X11R6/lib/X11/rgb" FontPath "unix/:7100" EndSection
Section "Module" Load "dbe" Load "extmod" Load "fbdevhw" Load "glx" Load "record" Load "freetype" Load "type1" Load "dri" EndSection
Section "ServerFlags" Option "AllowMouseOpenFail" "yes" EndSection
Section "InputDevice"
# Specify which keyboard LEDs can be user-controlled (eg, with xset(1)) # Option "Xleds" "1 2 3" # To disable the XKEYBOARD extension, uncomment XkbDisable. # Option "XkbDisable" # To customise the XKB settings to suit your keyboard, modify the # lines below (which are the defaults). For example, for a non-U.S. # keyboard, you will probably want to use: # Option "XkbModel" "pc102" # If you have a US Microsoft Natural keyboard, you can use: # Option "XkbModel" "microsoft" # # Then to change the language, change the Layout setting. # For example, a german layout can be obtained with: # Option "XkbLayout" "de" # or: # Option "XkbLayout" "de" # Option "XkbVariant" "nodeadkeys" # # If you'd like to switch the positions of your capslock and # control keys, use: # Option "XkbOptions" "ctrl:swapcaps" # Or if you just want both to be control, use: # Option "XkbOptions" "ctrl:nocaps" # Identifier "Keyboard0" Driver "kbd" Option "XkbModel" "pc105" Option "XkbLayout" "us" EndSection
Section "InputDevice" Identifier "Mouse0" Driver "mouse" Option "Protocol" "IMPS/2" Option "Device" "/dev/input/mice" Option "ZAxisMapping" "4 5" Option "Emulate3Buttons" "no" EndSection
Section "Monitor" Identifier "Monitor0" VendorName "Monitor Vendor" ModelName "Unknown monitor" HorizSync 31.0 - 54.0 VertRefresh 50.0 - 120.0 Option "dpms" EndSection
Section "Device" Identifier "Videocard0" Driver "nvidia" VendorName "Videocard vendor" BoardName "NVIDIA Quadro FX 4400" EndSection
Section "Screen" Identifier "Screen0" Device "Videocard0" Monitor "Monitor0" DefaultDepth 24 Option "NvAGP" "1" Option "TwinView" "true" Option "SecondMonitorHorizSync" "31.0 - 80.0" Option "SecondMonitorVertRefresh" "56.0 - 76.0" Option "MetaModes" "1600x1200, 1600x1200; 1280x1024, 1280x1024; 1280x1024, 1280x1024;" Option "TwinViewOrientation" "RightOf" Option "Xinerama" "on" SubSection "Display" Viewport 0 0 Depth 16 Modes "1024x768" "800x600" "640x480" EndSubSection SubSection "Display" Viewport 0 0 Depth 24 Modes "1024x768" "800x600" "640x480" EndSubSection EndSection
Subject: Re: [Freesurfer] a "redraw failed: no gl window open"
problem
From: nicks@nmr.mgh.harvard.edu To: freesurfer_zg@hotmail.com CC: freesurfer@nmr.mgh.harvard.edu Date: Tue, 18 Aug 2009 19:27:11 -0400
Guang,
which version of freesurfer are you running?
does glxgears work?
can you send me your /etc/X11/xorg.conf file?
Nick
On Tue, 2009-08-18 at 17:53 -0500, Guang Zeng wrote:
yeah, it didn't work
From: ppj@netfilter.com.br Date: Tue, 18 Aug 2009 19:46:02 -0300 Subject: Re: [Freesurfer] a "redraw failed: no gl window open"
problem
To: freesurfer_zg@hotmail.com
I suppose you have tried the trick bellow
setenv doublebuffer_flag 1
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- New Netfilter Small Business
2009/8/18 Guang Zeng freesurfer_zg@hotmail.com Hi, there,
I am still facing the problem of "redraw failed: no gl window open", I got another linux machine with Nvidia graphic card, I ran the tksurfer command "tksurfer bert lh inflated", it still gave me the "redraw failed: no gl window open" error.
surfer: current subjects dir: /home/m047599/freesurfer-install/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /home/m047599 surfer: Reading header info
from /home/m047599/freesurfer-install/freesurfer/subjects/bert/mri/T1.mgz
surfer: vertices=131369, faces=262734
Loading /home/m047599/freesurfer-install/freesurfer/surface_labels.txt
surfer: ### redraw failed: no gl window open surfer: double buffered window surfer: tkoInitWindow(bert) surfer: using
interface /home/m047599/freesurfer-install/freesurfer/lib/tcl/tksurfer.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_common.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkm_wrappers.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/fsgdfPlot.tcl
Reading /home/m047599/freesurfer-install/freesurfer/lib/tcl/tkUtils.tcl
Successfully parsed tksurfer.tcl reading white matter vertex locations...
I read a previously posted thread by Nick, it looks like we can download a new tksurfer.bin file to solve this problem at
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/nicks/stable/centos4_x86_64
But I clicked the link, the file has been removed. Does any one can help me get the new link of this file?
Thanks a lot!
Guang
Windows Live: Keep your friends up to date with what you do online. Find out more.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hotmail® is up to 70% faster. Now good news travels really fast.
Try
it now. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hotmail® is up to 70% faster. Now good news travels really fast. Try it now.
freesurfer@nmr.mgh.harvard.edu
-
Guang Zeng -
Nick Schmansky