I'm using 64 bit Ubuntu and installed freesurfer-Linux-rh9-stable-pub-v4.0.5-full.tar.gzftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer-Linux-rh9-stable-pub-v4.0.5-full.tar.gz Everything worked fine when I tested the installation with tkmedit and tksurfer. I then ran recon-all and got error message while loading shared libraries:libtiff.so.3. I have tried ln /usr/lib/libtiff.so.4 /usr/lib/libtiff.so.3
But still got same error message.
Ian,
Your best bet is to install the libtiff.so.3 rpms.
Nick
On Wed, 2008-08-13 at 12:35 -0700, lan lin wrote:
I'm using 64 bit Ubuntu and installed freesurfer-Linux-rh9-stable- pub-v4.0.5-full.tar.gz
Everything worked fine when I tested the installation with tkmedit and tksurfer. I then ran recon-all and got error message while loading shared libraries:libtiff.so.3. I have tried ln /usr/lib/libtiff.so.4 /usr/lib/libtiff.so.3
But still got same error message. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
libtiff.so.3 is typically provided by the ia32-libs package in Ubuntu and Debian (and presumably any other Debian-derived distros)
So you can install using the following command:
sudo aptitude install ia32-libs
I'm not sure which binary is doing the complaining, I don't see anything in $FREESURFER_HOME/bin that is linked against libtiff3 but I remember having to install the 32-bit compat library to make stuff work.
HTH,
mjp
On Aug 13, 2008, at 3:35 PM, lan lin wrote:
I'm using 64 bit Ubuntu and installed freesurfer-Linux-rh9-stable- pub-v4.0.5-full.tar.gz
Everything worked fine when I tested the installation with tkmedit and tksurfer. I then ran recon-all and got error message while loading shared libraries:libtiff.so.3. I have tried ln /usr/lib/libtiff.so.4 /usr/lib/libtiff.so.3
But still got same error message. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
My system is also 64 bit Ubuntu and met the same problem. while doing ln -sf usr/lib/libtiff.so.4 /usr/lib/libtiff.so.3 It works ok, so I guess you can try to create soft link instead of hard link~~
bin lv
2008-08-14
bin.lv
发件人： lan lin 发送时间： 2008-08-14 03:37:38 收件人： freesurfer@nmr.mgh.harvard.edu 抄送： 主题： [Freesurfer] error while loading shared libraries:libtiff.so.3
I'm using 64 bit Ubuntu and installed freesurfer-Linux-rh9-stable-pub-v4.0.5-full.tar.gz Everything worked fine when I tested the installation with tkmedit and tksurfer. I then ran recon-all and got error message while loading shared libraries:libtiff.so.3. I have tried ln /usr/lib/libtiff.so.4 /usr/lib/libtiff.so.3
But still got same error message.
freesurfer@nmr.mgh.harvard.edu
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bin.lv -
lan lin -
Mark J. Pearrow -
Nick Schmansky