I don't know about #1 (I think not). For #2 you shold use the subject names from the longitudinal analysis

On 02/26/2018 11:39 AM, Lisa Delalande wrote:

Hi FreeSurfer experts,

I would like to use the asegstats2table and the aparcstats2table commands on my longitudinal data, that have been processing following the longitudinal pipeline (recon-all -cross, - base and finally -long). And I have two questions :

1. Am I obliged to do the long_stats_slopes --qdec

./qdec/longi_presentacio.qdec.table.dat --stats aseg.stats --meas volume --do-avg --do-rate --do-pc1 --time months command before using the aseg/aparc commands ?

2. And I would like to know which subjectsID I have to choose for the

command line, example : asegstats2table --subjects *001_tp1 002_tp1*...etc. (cross)? OR *template_001 template_002*...etc (base)? OR *001_tp1.long.template_001 002_tp1.long.template_002*...etc (long)? Knowing that it's for a comparison test-retest (microlongitudinal : 1 month).

Thanks you for your precious help, Best regards,

Lisa

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