Yes, you just need to have it in the right format. I've attached an example.

On 08/24/2018 04:48 PM, miracle ozzoude wrote:

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Hello,

Can i specify a lookup table when using mri_gtmpvc? This is because I have a non-freesurfer segmentation (MALPEM) and i would like to perform partial volume on it without having to run freesurfer on the subject for PET analysis. I have a lookup table for the segmentation.

I know mri_gtmpvc expects (?.ctab) file from the segmentation however, it will require processing the subject with freesurfer and petsurfer. I only want to use the partial volume command. How do I make it use the lookup table i made rather than  ?.ctab file?

Thank you.

Best, Paul

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