Hi Matt,

I think you can use -t <xfm>, but it almost never fails for us. Do you want to send me an example of a failure? I did make some tweaks to it that might help. Or we can send you a newer version and you can try it out yourself Bruce

On Sun, 17 Apr 2011, Matt Glasser wrote:

Is it possible to convert an .xfm to an .lta or alternatively to initialize mri_em_register with an .xfm that one has manually generated? It is not doing a very good job for me.

Thanks,

Matt.