Hi Emily

it's going to be tough to get it past the gray matter lesions. If you have labels we could implement something to fill them in with surrounding tissue intensities I suppose, but we don't have anything at the moment

sorry Bruce On Wed, 31 Oct 2018, Emily Schwartz wrote:

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Hi Freesurfer team,

I was wondering if there is a way to edit incorrect surfaces due to lacunes? As you can see in the image the surfaces are incorrect. I tried editing the aseg, but this did not work. I have attached both images in the coronal and axial view as well as FLAIR (obviously there are other errors that need to be fixed in this subject as well).

I am using version 6.0 (freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c).

Any guidance is appreciated.

Thank you,

Emily

Emily Schwartz, B.A. Research Assistant Department of Neurology -- Cognitive and Motor Aging Albert Einstein College of Medicine