Hi,
I got the error running "trac-all -path -c configure.txt"
ERROR: Could not open ${SUBJECTS_DIR}/$Subject/dlabel/diff/lh.cst_AS_avg33_mni_flt_cpts_5.txt
I can only find only image files in the "dlabel/diff" directory, but not text files.
Which step(s) create the lh.cst_AS_avg33_mni_flt_cpts_5.txt file?
Thanks,
Ping
Hi Ping,
The text files get created in the trac-all -prior stage. Maybe something went wrong in that step. Is this the case for all the tracts or just for this tract? If you can send us the trac-all.log file under the scripts directory it'll be easier to troubleshoot as to what went wrong.
-Priti
Hi,
I got the error running "trac-all -path -c configure.txt"
ERROR: Could not open ${SUBJECTS_DIR}/$Subject/dlabel/diff/lh.cst_AS_avg33_mni_flt_cpts_5.txt
I can only find only image files in the "dlabel/diff" directory, but not text files.
Which step(s) create the lh.cst_AS_avg33_mni_flt_cpts_5.txt file?
Thanks,
Ping _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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