Hi:
I got the following fatal error:
CORRECTING DEFECT 61 (vertices=98413, convex hull=24013) Excessive topologic defect encountered: could not allocate 896316630 edges for retessellation Cannot allocate memory Linux image 2.6.28-16-generic #55-Ubuntu SMP Tue Oct 20 19:48:24 UTC 2009 i686 GNU/Linux
How can I correct it ?... I have a PC with 2.5 GB RAM, and iit is the first processing that fails with an error related to memory... Why ?... Is it really a memory problem ?... There is a tip and trick that allows me to correct it ?...
Sincerely,
Gonzalo Rojas Costa
Hi Gonzalo,
look at the ?h.orig.nofix or ?h.inflated.nofix and see if there is something dramatically wrong (e.g. attached cerebellum or skull). You can also look at the filled.mgz.
cheers, Bruce
On Tue, 24 Nov 2009, Gonzalo Rojas Costa wrote:
Hi:
I got the following fatal error:
CORRECTING DEFECT 61 (vertices=98413, convex hull=24013) Excessive topologic defect encountered: could not allocate 896316630 edges for retessellation Cannot allocate memory Linux image 2.6.28-16-generic #55-Ubuntu SMP Tue Oct 20 19:48:24 UTC 2009 i686 GNU/Linux
How can I correct it ?... I have a PC with 2.5 GB RAM, and iit is the first processing that fails with an error related to memory... Why ?... Is it really a memory problem ?... There is a tip and trick that allows me to correct it ?...
Sincerely,
Gonzalo Rojas Costa
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Bruce:
Yes... the orig.nofix and inflated.nofix have many problems (I send you some attached tif files)... Which is the file filled.mgz ?...
Sincerely,
Gonzalo Rojas Costa
Bruce Fischl escribió:
Hi Gonzalo,
look at the ?h.orig.nofix or ?h.inflated.nofix and see if there is something dramatically wrong (e.g. attached cerebellum or skull). You can also look at the filled.mgz.
cheers, Bruce
On Tue, 24 Nov 2009, Gonzalo Rojas Costa wrote:
Hi:
I got the following fatal error:
CORRECTING DEFECT 61 (vertices=98413, convex hull=24013) Excessive topologic defect encountered: could not allocate 896316630 edges for retessellation Cannot allocate memory Linux image 2.6.28-16-generic #55-Ubuntu SMP Tue Oct 20 19:48:24 UTC 2009 i686 GNU/Linux
How can I correct it ?... I have a PC with 2.5 GB RAM, and iit is the first processing that fails with an error related to memory... Why ?... Is it really a memory problem ?... There is a tip and trick that allows me to correct it ?...
Sincerely,
Gonzalo Rojas Costa
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
freesurfer@nmr.mgh.harvard.edu