Hi Victor

As explained in the wikifs_read_surf.m andfs_read_Y.m depend on Freesurfer's scripts so you need to have installed Freesurfer software package and included the Freesurfer's matlab subdirectory in your Matlab's search path.

Best -Jorge

El Martes 13 de Mayo de 2014 4:40, Victor Montal Blancafort victor.montal@gmail.com escribió:

Greetings,

The aim of this mail is about some problems that I am facing using the standalone copy (that is becouse I am using v5.1) of the LNE Matlab Tool provided on the FreeSurfer Wiki (http://surfer.nmr.mgh.harvard.edu/fswiki/LinearMixedEffectsModels).

Currently, I am carrying out a longitudinal mass-univariate study. However, I get blocked when I try to open the smoothed thickness '.mgh' file obtained using the 'mris_preproc' and 'mri_surf2surf' command or also when I try to open the fsaverage sphere.

Analyzing the code, I have realized that problems are caused due to that some '.m' files such as 'load_mgh.m' or  'read_surf.m' can't be opened because they are not provided on the package.  Should I download them from another source or maybe there is another problem I am not realizing?

Thank you in advance for you attention and your help!

Bests, Victor

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.