check to see if the cerebellum or skull is attached.

Bruce

On Wed, 25 Aug 2004, Jonathan Wisco wrote:

Hi, how do I fix the following error (taken from log file):

Finding true center and radius of Spherical Surface...done Surface centered at (0,0,0) with radius 100.0 in 8 iterationscould not allocate 16022 edges for retessellation Cannot allocate memory INFO: Src volume /tmp/mritotal_30123/orig_8_dxyz.mnc INFO: Target volume /usr/pubsw/packages/mni/1.0.4/data/mni_autoreg/average_305_8_dxyz.mnc DimSizes: 3, 86, 110, 68, 1 DataType: 1 MINC Linear Transform 2.0000 0.0000 0.0000 -86.0950 0.0000 2.0000 0.0000 -126.5100 0.0000 0.0000 2.0000 -58.2500 0.0000 0.0000 0.0000 1.0000 Done reading minc reading T1 volume from T1... reading wm segmentation from wm... 55686 ambiguous faces found in tessellation 3 of 63 overlapping edges discarded retessellating defect 1 with 16022 vertices (convex hull=76251). ERROR: mris_fix_topology exited with non-zero status

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Filesystem 1k-blocks Used Available Use% Mounted on gam:/local_mount/space/gam/2 240362656 83370280 144782576 37% /autofs/space/gam_002

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recon-all exited with errors at Wed Aug 25 15:38:31 EDT 2004

Thanks, Jon