Hello, I repeated same mri_glmfit at multiple depth of cortical thickness and merged the maximal values of the sig.mghs for all depths to a merged_sig.mgh (as in Wang X, et al. Neuroimage. 49(4):3075-85; 2010). I need to run Monte Carlo simulationhttps://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-June/030604.html on the merged_sig.mgh. I have the .fsgd and .mtx files for this glm design but I don't have a smoothed input image as fs.8.mgh for this merged sig.mgh. Can I modify the mri_glmfit-sim to run the correction without calling fs.8.mgh?
Thank you.
Xin
Subject: can I run Monte Carlo simulation without calling mri_glmfit
Hello, I repeated same mri_glmfit at multiple depth of cortical thickness and merged the maximal values of the sig.mghs for all depths to a merged_sig.mgh (as in Wang X, et al. Neuroimage. 49(4):3075-85; 2010). I need to run Monte Carlo simulationhttps://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-June/030604.html on the merged_sig.mgh. I have the .fsgd and .mtx files for this glm design but I don’t have a smoothed input image as fs.8.mgh for this merged sig.mgh. Can I modify the mri_glmfit-sim to run the correction without calling fs.8.mgh?
Thank you.
Xin
freesurfer@nmr.mgh.harvard.edu
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Wang, Xin