Hi freesurfer gurus,
We are trying to do reconstruction in tksurfer section according to the text. We have a question in "Getting started with your own data" section.
In the text, the following commands are written,
recon-all -s <subjid> \ -i <path_to_dicoms>/95555-2-1.dcm -i <path_to_dicoms>/95555-3-1.dcm
In the above commands, 95555-2-1.dcm and 95555-3-1.dcm represent the data within the same session? Because the directories, path_to_dicoms, were the same, I thought so. However, 2 or 3 in each 95555-2-1.dcm and 95555-3-1 might represent the session number. We can't understand which is right.
Please give me your suggestion. Thank you,
Kenta
Hi Kenta,
these are two different images usually from the same session. Freesurfer then does motion correction and averages the images to create a single input image for further processing.
Best, Martin
On Wed, 2009-08-19 at 16:26 +0900, 卯野賢太 wrote:
Hi freesurfer gurus,
We are trying to do reconstruction in tksurfer section according to the text. We have a question in "Getting started with your own data" section.
In the text, the following commands are written,
recon-all -s <subjid> \ -i <path_to_dicoms>/95555-2-1.dcm -i <path_to_dicoms>/95555-3-1.dcm
In the above commands, 95555-2-1.dcm and 95555-3-1.dcm represent the data within the same session? Because the directories, path_to_dicoms, were the same, I thought so. However, 2 or 3 in each 95555-2-1.dcm and 95555-3-1 might represent the session number. We can't understand which is right.
Please give me your suggestion. Thank you,
Kenta _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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